Clostridium carboxidivorans: Ccar_00585
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Entry
Ccar_00585 CDS
T03979
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cck
Clostridium carboxidivorans
Pathway
cck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ccar_00585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cck03400
]
Ccar_00585
Enzymes [BR:
cck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ccar_00585
DNA repair and recombination proteins [BR:
cck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ccar_00585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
PriA_CRR
Helicase_C
T2SSE
AAA_30
AAA_19
AAA_11
SLFN-g3_helicase
zinc-ribbons_6
MRP-L20
UvrD-helicase
HTH_24
nSTAND3
zf-CHY
TrwB_AAD_bind
DUF1258
PIF1
Viral_helicase1
FtsK_SpoIIIE
DUF87
Trm112p
Motif
Other DBs
NCBI-ProteinID:
AKN29412
UniProt:
C6PUX0
LinkDB
All DBs
Position
111711..113915
Genome browser
AA seq
734 aa
AA seq
DB search
MYSYAGIVVNNSSLQVDRIFTYKIPETLVNKIDIGIRVKVPFGMGNKKIDGFVLELYDEY
TGNTRIKEISGICDKFTLFTRDDVILIKEMKSKYLSTYLECIKVFIPTGISSGMKNKTEI
QVYTGEVELSEKFQKEPYLSIYSIVKKNPGIYNKNALAKKFNISLSSINTMIKHGFLAQK
ENIVNRYNVRQYEKYSKKILNGEQQNAVDTILNSPKSVFLIHGVTGSGKTEIYMHLVSNM
IEKNKESIILVPEIALTPQMVERFKGRFGKDISVFHSKLSPGERYDEWLRVKEGKVKVAI
GARSAIFLPFSNLGMIVIDEEHEGSYKSDSNPKYNAREIGEMKCRISNCKLILGSATPSV
ETYYRCKNKDIELITIKNRADNAIMPKIEIVDMRQELLNNNKSMFSKKLYESIEERLNKK
EQIILFLNRRGFSTFVSCRKCGYVFKCDNCDISLTYHRDEGKLVCHYCGSSRKSPSICPE
CGSKYVKYFGVGTEKIEQEIKKYFPEARTLRMDFDTTRGKNSYETIYNTFKEEKADILIG
TQMVAKGLDFKNVTLVGIIAADLSLNLPDFRSNERTFQLITQVSGRAGRGEKRGEVIVQT
YSPENYSIICATDNNYKGFYEEEIKVRNIMEYPPFVDLFLINMSSKNENILIKSIQNVGI
FLKNVLEKNDTIKMLGPCPCEISKIKEFYRWQIILKGNIEKEVKEKIRKLVYDLLKNVYN
DIRVSIDVNPNSLL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtgtacagttatgcaggtatagtagttaataatagttccttacaagtagatagaattttt
acatataaaataccagaaacattagtaaataaaatagatattggcattagggtaaaagtt
ccttttggtatgggaaataaaaaaatagatggatttgtgttagaactttatgatgaatat
acaggtaatacaagaattaaagaaatatcaggaatatgcgataagtttaccttgtttacc
agagatgatgtaattcttattaaagagatgaagagtaaatatttgtcaacttatttggaa
tgtataaaagtttttattccaacaggtatttctagtggaatgaaaaataagacagaaata
caagtgtatacgggagaagtagagctaagtgaaaaatttcaaaaagaaccctatttaagt
atatactcaatagtgaaaaaaaatccgggtatttacaataaaaatgccttagcaaaaaaa
tttaatatatcattatcttctataaatacaatgataaaacatggttttcttgctcaaaaa
gagaatatagtaaatagatataatgtaaggcagtatgaaaaatactccaaaaagatttta
aatggggaacaacaaaatgctgtagatactatattgaattctcccaaaagtgtgtttctg
atacatggagttacaggtagtggaaaaacggaaatatacatgcatttggtgagtaacatg
atagaaaaaaataaagaatctataatactagtacctgaaattgcacttacacctcaaatg
gtagaaaggtttaaaggcagatttggaaaggatataagtgttttccatagtaagttatca
ccaggggaaagatatgatgaatggctaagggtaaaggaaggaaaagttaaagtagcaata
ggagctagatctgcaatatttcttccttttagcaatctaggaatgatagttatagatgaa
gaacatgaaggaagttataaatctgacagtaatcctaaatataatgccagagaaattgga
gaaatgaaatgtagaataagtaattgtaagttaattctaggttcagccacaccatctgta
gaaacctactatagatgtaaaaataaagatatagaactcataactataaaaaatagagct
gataatgctattatgcctaaaattgaaattgttgatatgagacaagaattgctaaacaat
aataaatctatgtttagtaaaaaactttatgaatctatagaagaaagattaaataaaaaa
gaacaaataatacttttcttaaatagaagaggtttttctacatttgtttcctgtagaaag
tgtggttatgtattcaagtgtgataattgtgatatatctctaacctatcatagggatgaa
ggaaaattagtgtgccactattgcggtagcagcagaaaatcacctagtatttgtcctgaa
tgcggaagtaagtatgttaagtattttggtgttggtactgaaaagatagaacaggaaata
aaaaagtattttcctgaggctagaactttaagaatggattttgataccaccagaggtaaa
aattcttatgaaacaatatacaacacttttaaagaagaaaaggcagatatactcatagga
actcaaatggtagcaaaaggattagactttaaaaatgttacactagtagggataattgca
gcagatttatctttaaatttgccagacttcagatctaatgaaaggacatttcagcttatt
acacaggtttcaggtagagctggcagaggggaaaaaagaggagaagttattgttcaaacc
tatagcccggaaaactatagtataatatgtgcaactgataataattataaaggtttctat
gaagaagagataaaagttaggaacattatggagtatccaccgtttgttgatctatttctt
attaatatgagcagcaagaacgaaaatatattaataaaaagtatacaaaatgttggcata
tttttaaaaaatgtattagaaaaaaatgatacaattaaaatgttaggaccttgtccttgt
gaaatttctaaaattaaagaattttatagatggcaaataatattaaagggcaatatagaa
aaggaagttaaggaaaaaataagaaaactagtttatgatttattaaaaaatgtttataat
gatataagggtaagtattgatgtaaaccctaatagtttattatag
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