KEGG   Clostridium carboxidivorans: Ccar_00970
Entry
Ccar_00970        CDS       T03979                                 
Name
(GenBank) ribonuclease
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
cck  Clostridium carboxidivorans
Pathway
cck03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cck00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Ccar_00970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cck03019]
    Ccar_00970
Messenger RNA biogenesis [BR:cck03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Ccar_00970
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_NusA_2nd
Other DBs
NCBI-ProteinID: AKN29486
UniProt: C6PQV5
LinkDB
Position
189424..190965
AA seq 513 aa
MSPIIYEIIAGVIIAIGLLVEFYVVKNKAHAIKSQAQEESNRLKEETERDAESKKKEAIL
EAKEEVHKLRSDLEKESRDRRNESQRLERRLIQREELLDKKSDMLEKREESISKKQQEIS
EIQANVEKLYEKERQELEKLSGLTTEDAKEILLEEVSKEIKHESAMMIKEVETKAKEEAD
KRAREVITCAIQRCAADHVAETTVHVVTLPNDEMKGRIIGREGRNIRTLETLTGVDLIID
DTPEAVILSGFDPIRREVARIALEKLIIDGRIHPARIEEMVEKAKKEVENDIKEEGEQAT
FETGVHGLHLELIKLLGRLKYRTSYGQNVLKHSIEVAYLAGLMASELGIDPTVAKRAGLL
HDIGKAVDHEVEGPHAIIGSEVAKKYRESGVIVNAIAAHHGDVESISLEAVLVQAADAIS
AARPGARRETLEAYIKRLEKLEEIANTCEGVEKSYAIQAGREIRIMIKPEEIDDAGAIEM
ARNIVKTIENELEYPGQIKVNVIRETRAIEYAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
gtgagtcctattatatatgaaattattgctggcgtaataatagccattggtttattagta
gagttttatgttgtgaaaaataaagcgcatgctataaaatcacaggctcaagaagagtct
aatagattaaaagaagaaacagaaagagatgctgagtctaaaaagaaagaggctatactt
gaagctaaggaagaagttcataaattaagatcagatttagaaaaagaatcaagagataga
agaaatgaaagtcaaaggcttgaaagaaggttaatccaaagagaagaattacttgataaa
aaaagtgatatgttggaaaaaagagaagaaagtataagtaagaagcaacaagagattagt
gaaattcaagcaaatgtagagaaattatatgaaaaagaaagacaggaattagaaaagctt
tcaggtttaacaactgaagacgctaaagaaattttattagaagaagttagtaaggaaata
aaacatgaatctgcaatgatgattaaagaagtggaaacaaaagcaaaagaggaagcagac
aagagggcaagagaagtaataacttgtgctatccaaaggtgtgcagcagatcatgtggct
gaaactacagttcatgtagttactcttcctaacgatgaaatgaaaggaagaataataggt
agagaaggtagaaacatacgaacccttgaaactcttactggtgtagatttaattattgat
gatacacctgaagcagtaattctttcaggatttgatccaataagaagagaagtagcaaga
atagcattagaaaaattgattattgatggaagaattcatccagcaagaatcgaagaaatg
gttgaaaaagctaaaaaagaagttgaaaatgatatcaaagaggaaggcgaacaagcaact
tttgaaacaggagtacacggtcttcatttagaattaataaagttattaggaagattgaaa
tataggaccagttatggccaaaatgtactaaaacattctatagaggttgcttatttagca
ggtcttatggcttcagaacttggaatagatccaactgtagccaagagagcaggattacta
catgacataggtaaggctgtggatcatgaagtagaaggtcctcatgctatcattgggtca
gaagttgccaaaaagtatcgtgaatctggtgtaatagttaatgctattgcagctcatcat
ggtgatgtagaatctatatccttagaagcggtacttgttcaagcagcagatgcaatatca
gctgcaagacctggtgcaagaagagaaactttagaagcttatattaagagattagaaaaa
ttagaagaaatagcaaacacatgtgaaggcgtagaaaagtcatatgccattcaagcaggt
agagaaatcagaattatgataaaaccagaagaaattgatgatgcaggtgctattgaaatg
gcaaggaacatagttaaaactatagaaaatgaattagaatatcctggtcaaataaaagtt
aatgttataagagaaacacgtgccatcgaatatgcaaaatag

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