Coregonus clupeaformis (lake whitefish): 121532020
Help
Entry
121532020 CDS
T08357
Symbol
snupn
Name
(RefSeq) snurportin-1
KO
K13151
snurportin-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121532020 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121532020 (snupn)
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
121532020 (snupn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
DNA_ligase_A_M
Motif
Other DBs
NCBI-GeneID:
121532020
NCBI-ProteinID:
XP_041693593
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MDDLTQALSASFAVSKEANSTAAPHPRMAQYKTKFSVLEQSERRRRFLDLQKTKRLNYVN
HARRLADGDWTGADSDEEEVVVDRKEEEQQEKEKDAEDEGMEIERKKLPKYYANQLMLSE
WLVDVPQELDTDWLMVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAM
GKDYTILDCIYSEVERTYFILDVMCWRGHPVYDCPTEFRFYWLQSKVQETDGMADITKRN
PFKFVSLQSTACSTEAIQQALATEYNFNVDGLLFYHRQTHYTPGSTPLVGWLRPYMVVDI
LGVDVPVGPLTAKPDYAGHQLAQIREHKKTSNHVRPGDLNGRYELEHLSTPDQEKGDGDA
ATSPRSRPLKESRMETSEKSAS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccttacccaagctctctcggccagcttcgccgtctccaaggaggccaacagc
acagccgccccccatccacggatggcccagtacaagaccaagttcagcgttttggagcaa
agcgagcgacggcggcgctttctagatctgcagaaaacgaaaaggctgaattatgtcaac
catgcacgccgtctggctgatggggactggacaggggcagatagtgatgaggaagaagtg
gtggtggacagaaaggaggaggaacagcaggagaaggagaaggatgcagaggatgagggg
atggagattgagaggaagaagttgccaaagtactatgccaaccagctcatgctgtcagag
tggctagtggacgtccctcaggaactggacactgattggctcatggtggtctgtcccgtg
gggaagcgctctctcatcgtcgcctccaaggggtccactgcagcatacaccaaaagtggt
tactgtgtgaaccgcttcccttctctgttgcctggagggaacagacacaactctgcaatg
ggaaaagattacaccatcctggactgtatctacagtgaggtggagcggacctacttcatc
ctggatgtcatgtgttggaggggccatccagtgtatgactgtccgacggagttccggttc
tactggctccagtcgaaagtccaggagactgatggcatggctgacattaccaaaaggaac
cctttcaagtttgtgagtcttcaaagcactgcctgctcaacagaagccatacagcaagca
cttgcaactgagtacaacttcaatgtggacggacttctgttttaccaccggcagacccac
tacacccccggcagcacccctctggtgggctggctgcggccctacatggtggtcgacatc
ctgggtgtggatgtcccggtggggcccctcaccgcaaagcccgactatgccggccaccag
ctggcccagatccgggagcacaagaagacctccaaccatgtccggccgggggacctgaac
ggtcgctacgagctggagcacctatccacccccgaccaggagaagggagatggagacgcc
gccacctcgccccgcagcagaccgctgaaggaatcgcgcatggagacctcggagaagagc
gcaagttag
DBGET
integrated database retrieval system