KEGG   Coregonus clupeaformis (lake whitefish): 121532020
Entry
121532020         CDS       T08357                                 
Symbol
snupn
Name
(RefSeq) snurportin-1
  KO
K13151  snurportin-1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121532020 (snupn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121532020 (snupn)
Spliceosome [BR:cclu03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    121532020 (snupn)
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Snurportin1 mRNA_cap_enzyme DNA_ligase_A_M
Other DBs
NCBI-GeneID: 121532020
NCBI-ProteinID: XP_041693593
LinkDB
Position
Unknown
AA seq 382 aa
MDDLTQALSASFAVSKEANSTAAPHPRMAQYKTKFSVLEQSERRRRFLDLQKTKRLNYVN
HARRLADGDWTGADSDEEEVVVDRKEEEQQEKEKDAEDEGMEIERKKLPKYYANQLMLSE
WLVDVPQELDTDWLMVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAM
GKDYTILDCIYSEVERTYFILDVMCWRGHPVYDCPTEFRFYWLQSKVQETDGMADITKRN
PFKFVSLQSTACSTEAIQQALATEYNFNVDGLLFYHRQTHYTPGSTPLVGWLRPYMVVDI
LGVDVPVGPLTAKPDYAGHQLAQIREHKKTSNHVRPGDLNGRYELEHLSTPDQEKGDGDA
ATSPRSRPLKESRMETSEKSAS
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggatgaccttacccaagctctctcggccagcttcgccgtctccaaggaggccaacagc
acagccgccccccatccacggatggcccagtacaagaccaagttcagcgttttggagcaa
agcgagcgacggcggcgctttctagatctgcagaaaacgaaaaggctgaattatgtcaac
catgcacgccgtctggctgatggggactggacaggggcagatagtgatgaggaagaagtg
gtggtggacagaaaggaggaggaacagcaggagaaggagaaggatgcagaggatgagggg
atggagattgagaggaagaagttgccaaagtactatgccaaccagctcatgctgtcagag
tggctagtggacgtccctcaggaactggacactgattggctcatggtggtctgtcccgtg
gggaagcgctctctcatcgtcgcctccaaggggtccactgcagcatacaccaaaagtggt
tactgtgtgaaccgcttcccttctctgttgcctggagggaacagacacaactctgcaatg
ggaaaagattacaccatcctggactgtatctacagtgaggtggagcggacctacttcatc
ctggatgtcatgtgttggaggggccatccagtgtatgactgtccgacggagttccggttc
tactggctccagtcgaaagtccaggagactgatggcatggctgacattaccaaaaggaac
cctttcaagtttgtgagtcttcaaagcactgcctgctcaacagaagccatacagcaagca
cttgcaactgagtacaacttcaatgtggacggacttctgttttaccaccggcagacccac
tacacccccggcagcacccctctggtgggctggctgcggccctacatggtggtcgacatc
ctgggtgtggatgtcccggtggggcccctcaccgcaaagcccgactatgccggccaccag
ctggcccagatccgggagcacaagaagacctccaaccatgtccggccgggggacctgaac
ggtcgctacgagctggagcacctatccacccccgaccaggagaagggagatggagacgcc
gccacctcgccccgcagcagaccgctgaaggaatcgcgcatggagacctcggagaagagc
gcaagttag

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