Coregonus clupeaformis (lake whitefish): 121532086
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Entry
121532086 CDS
T08357
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121532086 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121532086 (bbs4)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121532086 (bbs4)
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
BBSome
121532086 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
TPR_14
TPR_17
TPR_16
TPR_12
ANAPC3
TPR_CcmH_CycH
TPR_6
TPR_9
TPR_Slam
ARM_TT21_2nd
TPR_7
TPR_15
TPR_10
ARM_TT21_N
NatA_aux_su
Wzy_C_2
TPR_20
ARM_TT21_4th
PknG_TPR
ARM_TT21_C
ARM_TT21_5th
TPR_MalT
Iml2-TPR_39
HrpB1_HrpK
DUF2989
Clathrin
Motif
Other DBs
NCBI-GeneID:
121532086
NCBI-ProteinID:
XP_041693714
LinkDB
All DBs
Position
19:complement(22881816..22900483)
Genome browser
AA seq
529 aa
AA seq
DB search
MADDNPVADVQLPPTSEIRKPRPKKAPELPILERRNWLIHLHYIRKDYETCKAIIKEQLQ
ETRGMCEYAVYVQALILRLEGKIQQSLDLFQSCAILNPGSSDNLKQVARSLFLLGKHKAA
IEVYNEASQLNETDWEISHNLGVCYIYTKDFNRAEEQLNIALELSKHDLTYMMLGKIHLL
EGDTDKAIDVYRSAVEFSPENTDLLTTLGLLYMQQGKYQKAFEHLGNALTYDPNNFKAIL
AAGSMMQTHGDYDVAMNKYRVAAYAVPESSPLWNNIGMCFFGNKKYVAAISCLKRANYLS
PFDWKILYNLGLVHLTMQQYASAFHFLSAAVNLQPKMAELYMLLAVALTNMDDGENAKRS
YEQAVSLDECNPLINLNFAVLLYNQGDKKGATDQYLEMERKVMESSHNAEFDPELIEMAQ
KLASALQVGETSVWTKPGKDSKVGQRSKTTSLQPLGTNQALGQAMSSAASKSIQLAAGSK
APPKSISTSLPPDEEHDVENAPSPPLGDPESEEPKAKEKKKSKSKPVAE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacaatcccgtggcggatgttcaacttcctcccacttctgaaatcaggaag
cctcgtcctaaaaaagctcctgagctccctattctggagagacgaaactggctcatccac
cttcactacatccgtaaagactatgagacctgtaaggcaatcatcaaagagcagctacaa
gagaccagggggatgtgtgaatatgccgtctatgtacaagctttaatccttcgcctggaa
gggaaaatccagcagtcactggacctgttccagagctgtgcaatactcaaccctggcagc
tcggataacctcaaacaagtggccagatccctatttctccttggtaagcataaggctgcc
atagaggtttacaatgaggcttcacaactcaatgagacagactgggagatcagccataac
ttaggtgtgtgctacatctataccaaagacttcaaccgtgcagaagaacagttgaacatc
gccctggagttgagcaagcacgacctgacctacatgatgctgggaaagattcacctgctg
gaaggggacactgacaaagccatcgacgtgtacaggagtgccgttgagttttctcctgaa
aacacggatcttctcaccactcttggcctgctatacatgcagcaaggcaaatatcagaaa
gcctttgagcaccttgggaatgccctgacgtatgaccccaacaactttaaggccatcctg
gcagctggcagcatgatgcagacgcatggggactatgatgttgccatgaataagtaccgc
gtggcagcttatgctgtacctgagagctcgcccctctggaataacattggcatgtgcttc
ttcggaaacaagaaatatgtggcggccatcagctgtctaaagagggccaactacctgtct
ccgtttgactggaaaatcctgtacaacctgggcctggtgcacctcaccatgcagcagtac
gcctcagccttccacttcctcagtgctgccgtcaacctgcagccaaagatggccgagctc
tacatgctgctggcagttgctcttactaatatggatgacggggagaatgccaagcgatca
tatgagcaagcagtgtcgttggatgagtgtaaccctttgatcaatctgaatttcgcagtc
ctgttgtacaatcaaggagacaaaaaaggagccacagatcagtacctggagatggagagg
aaagtgatggaaagcagccataatgcagaatttgacccagagctcattgagatggcacag
aagttggcatctgctctccaggtgggagagacctcggtgtggaccaagccaggtaaggac
tccaaagtcggtcagcgctccaagaccacgtccctgcagcccctgggcaccaaccaggcc
cttgggcaggccatgtcttcagctgccagcaaaagcatccagctagctgcaggctctaag
gctccacccaagtccatctccacctccttacccccagatgaagagcatgatgtggagaat
gccccttcccctcccctaggggacccggagtcagaggagcccaaagccaaagaaaagaag
aagagcaagtctaaacctgtggctgagtag
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