Coregonus clupeaformis (lake whitefish): 121532104
Help
Entry
121532104 CDS
T08357
Name
(RefSeq) protein fem-1 homolog B
KO
K10349
protein fem-1 homolog B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121532104
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
121532104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
121532104
NCBI-ProteinID:
XP_041693740
LinkDB
All DBs
Position
19:22220058..22223565
Genome browser
AA seq
627 aa
AA seq
DB search
MDSLAGYVYKAAAEGRVLTLAALLLNHSEAETRYLLSYVTHLAGQRSTPLIIAARNGHDK
VVRLLLDHYRVDTEQTGTVRFDGYVIDGATALWCAAGAGHFEVVRQLVCHQANVNHTTVT
NSTPLRAACFDGRLDIVKYLVEHQANISIANKYDNTCLMIAAYKGHTDVVGFLLEHGADP
NAKAHCGATALHFAAEAGHLDIVKELVRCQAAMVVNGHGMTPLKVAAESCKADVVELLLS
HAECDPHSRIEALELLGASFANDRENYDILKTYHYLYLAMLERHRDVGALIAKELLPPIE
AYGGRGECRTPQELEAIRTDRNALHMEGLMVRERILGSDNIDVSHPIIYRGAVYADNMEF
DQCIKLWLHALLLRQKGNRNTHKDLLRFAQVFSQMVHLKEPVGAEPVKQVLRCSVLEIQR
SMARVEAAPEAELHTAMDNYESNVFTFLYLVCISTKTVCGEEERALLNKQIYNLIQLDPR
SREGSSLLHLAISSSTPVDDFHTNDVCSFPNAQVTKLLLDCGAQVNAVDHEGNSPLHIIV
QYNRPISDFLTLHAIIISLVEAGAHTDMTNKQKKTPLDKSTTGVSEILLKTQMKMSLKCL
ASRAVRQHQITYRNQIPKTLEEFVEFH
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggactcgcttgccgggtacgtatacaaagcggctgctgagggccgagtcctgacgctg
gccgccctgctgctcaaccactccgaggccgagacacgatatttactgagttacgtgact
cacctggctggccaacggtcaactcctctcatcattgcagctcgaaacggacacgacaaa
gttgtgaggctgctgctggatcactacagggtggatactgaacagactggcacagtcaga
tttgatgggtatgtcattgacggggccaccgcgttgtggtgtgcggctggcgcaggacac
tttgaggtggtccgccagttggtgtgccaccaggctaatgtcaaccacaccactgtcacc
aactccacccccctgagggcggcctgctttgacgggcgcctggacattgtgaaatacctg
gtggaacaccaggccaacatcagcatcgccaacaagtacgacaacacctgcctgatgatc
gccgcctacaagggccacacagacgtggtgggctttctgctggagcacggtgccgacccc
aacgccaaggcccactgcggggccaccgccctgcactttgctgccgaggcaggccacctg
gacatcgtgaaggagctggtgcgctgccaggcagccatggtggtgaacggccacggcatg
acgccgctcaaagtggcggcggagagctgcaaggcggacgtggtggagctgctgctgtcg
cacgccgaatgtgacccgcacagccgcatcgaggccctggagctgctgggtgcctcgttc
gccaacgaccgggagaactatgacatcctcaagacctaccactacctctacctggccatg
ctggagcgccaccgcgatgtcggcgcgctcatcgccaaggagctactgccgcccatcgag
gcctacggcggtaggggcgagtgccgcaccccgcaggagctggaggccatccggacggac
cgcaatgcgctgcacatggagggcctgatggtgcgcgagcgcatcctgggctcggacaac
atcgacgtgtctcaccccatcatctaccggggtgccgtgtatgccgacaacatggagttc
gaccagtgcatcaagctgtggctgcacgcgctgctcctgcgccagaagggcaaccgcaac
acgcataaggacctgctgcgcttcgcccaagtcttctcccagatggtgcacctgaaggag
ccggtgggggcagagccggtgaagcaggtgctgcgctgcagcgtgctggagatccagagg
agcatggccagggtggaagcagcacctgaggccgagcttcacacggctatggacaactac
gagtccaacgtgttcaccttcctctacctggtgtgcatcagcaccaagacagtgtgcggc
gaggaggagcgcgcccttctcaacaagcagatctacaacctgatccagctggacccgcgc
tcgcgggagggctcgtctctcctgcacctggccatcagctccagcaccccagtggacgac
ttccacaccaacgacgtgtgcagcttccccaacgcgcaagtaaccaagctgctgctggac
tgcggcgcgcaggtgaacgcagtggaccacgagggcaacagtccgctgcacatcatcgtg
cagtacaaccggcccatcagcgacttcctgacgctgcacgccatcatcatcagcctggtg
gaggcgggtgcccacactgacatgaccaacaagcaaaagaagacgccgctggacaagagc
accacgggtgtgtcggagatcctgctcaagacccagatgaagatgagcctcaagtgcctg
gcgtcgcgggccgtgcgccagcaccaaatcacataccgcaaccagatccctaagactctg
gaggagtttgtggagttccactga
DBGET
integrated database retrieval system
