Coregonus clupeaformis (lake whitefish): 121533327
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Entry
121533327 CDS
T08357
Name
(RefSeq) zinc finger protein ubi-d4
KO
K13196
zinc finger protein ubi-d4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121533327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121533327
03036 Chromosome and associated proteins [BR:
cclu03036
]
121533327
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121533327
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121533327
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
zf_RING_Vps8
PHD_4
zf-C2H2
PHD_2
zf-C2H2_4
zf-H2C2_2
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
121533327
NCBI-ProteinID:
XP_041695093
LinkDB
All DBs
Position
2:complement(11566721..11571255)
Genome browser
AA seq
407 aa
AA seq
DB search
MAAAVDSVVKVLGEQYYKDAMEQCHSYNARLCAERSILMPFIDSQTGVAQSNCYIWMEKR
HRSAGIAPGQLYSYPSRRWRKKRRSHPPEDPRLAFPPIKSAELELGLKRDAVGAVDGSSL
EALLKGEPLERRGPPDPRAPEDNPATPEPVAAMVSSHTSSGRIRKRVLDHDDYLDDLDDE
DFEDETPKRRGKGKSKGRGVANGKKKMEAAAAALEEQDKPYACDICGKRYKNRPGLSYHY
THSHLAEEEGEDREEIESPPPRRQPEAHKTPKKGPNGLALPNDYCDFCLGDSAHNQKTGQ
SEELVSCSDCGRSGHPSCLQFTDVMMAAVKTYRWQCIECKCCNVCGTSENDDQLLFCDDC
DRGYHMYCLDPPMTEPPEGSWSCHLCLALLKDKASIYKQQSLTTEDE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgtagatagtgttgtgaaagtgctcggggagcagtactataaggatgct
atggaacagtgccacagctataacgcccgtctgtgtgcggagaggagcatcctgatgcct
ttcatcgactctcagacgggtgttgctcaaagcaactgctacatctggatggagaagaga
cacaggagtgcaggcattgctcctgggcagctgtatagctatccgtctcgacgctggagg
aagaaacgacgatcccaccctcccgaggacccccgtttggccttcccccctatcaaatca
gcggagctggagctgggtcttaaacgggatgccgtgggagcggtggacggcagcagcctg
gaggccctgctgaagggggagcccctggagaggaggggcccgccggacccccgggctccg
gaggacaacccagccacacctgaacccgtggccgccatggtctccagccacacctcctct
ggacgcatccgcaagagggtgctggaccacgatgactacctggatgatctggacgatgag
gactttgaggacgagaccccaaagagacgagggaagggcaagtccaagggtcgtggagtg
gccaatggaaagaagaaaatggaggcagccgctgcagccctggaggagcaggacaaacct
tacgcctgtgacatctgtgggaagcgctataagaaccgtccgggcctgagctaccactac
acacactcccatctggcggaggaagagggggaggacagagaggagatagagtcccctccc
ccccggcgccagcctgaggcgcacaagactcctaagaaaggccctaacggtcttgccctg
cccaacgactactgcgacttctgtctgggagactccgcccacaaccagaagaccggccag
tcagaggagctggtatcctgctcagactgcggacgctctggtcacccatcctgcctgcag
ttcacagatgtgatgatggcagcagtgaagacgtatcgctggcagtgtatcgagtgcaag
tgctgcaatgtctgtggaacctcagagaacgacgaccagctgctgttctgtgatgactgt
gatcgaggataccacatgtactgcctcgaccctcctatgactgagcccccagaaggtagt
tggagttgtcacctttgcctggcgctgctgaaggacaaggcatccatatacaagcagcag
agcctcaccacagaggatgaatag
DBGET
integrated database retrieval system
