Coregonus clupeaformis (lake whitefish): 121533635
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Entry
121533635 CDS
T08357
Symbol
lsg1
Name
(RefSeq) large subunit GTPase 1 homolog
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121533635 (lsg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121533635 (lsg1)
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
GTPases
121533635 (lsg1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
AIG1
Motif
Other DBs
NCBI-GeneID:
121533635
NCBI-ProteinID:
XP_041695691
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Position
20:complement(19370087..19377463)
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AA seq
666 aa
AA seq
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MGKKKSAMGLGRSLIKERLNAGRGNKRGDTWLHTSELNDGYDWGRLNLQSVTEQSSMDDF
LATAEMAGTEFVAEKLNIKFVAAEARAGLLTAEETAKLKKLHEENKQLLRIPRRPHWDES
TSPEVLQQTERDSFLEWRRELAELEEEQKMILTPFERNLDFWRQLWRVIERSDVVVQIVD
ARNPLLFRCPDLECYVKEVSRYKVNLLLVNKADLLTRQQRRIWARYFQREGLRAVFWSAL
VENERLEAEEKGMEVEEQEDEKSEAEDEEEGMPDNDNVSRRREVEDNKEESEEEENEESD
MEEEQQSGEQFKDCVAEGDWQTASEGEEVSEGEEISEGEEASEGEEADDEESIDGSTHGS
AFHNSSRLLTKDELLAIFKAAHDGPTLKEGELTVGLVGYPNVGKSSTINTILRNKKVSVS
VTPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICCGILPIDQIRDHVPAISLVC
QTIPRDVLEGTYGINIIRPREDEDPDRIPNYEELLMAYGYMRGFMTTHGQPDQSRSARYI
LKDYVVGKLLYCHPPPHISAADFQPQHSKFQSGDADGEDSKIGNKPSKVKRHENLVDKNF
FHQENVRALTKGVQSFMGYKEGSIGQRELVNQGKPGLEQPVGKPWKKHGNRNKKEKVRRL
TKHLDA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaagaagtctgccatggggctcgggagatcactgataaaagagagactcaac
gcaggccgaggcaacaagaggggcgatacttggctccacaccagtgaactgaacgatggc
tacgattggggtcgtctcaacctgcagtcagtgactgaacagagctctatggatgacttc
cttgcaactgctgaaatggctgggacagagtttgttgcagaaaagctcaacatcaagttt
gtggcagctgaagctcgggcaggattactgacagctgaggagacagcaaagctgaagaag
ctgcacgaagagaacaaacaactcctcagaattccacgaaggcctcactgggatgagagc
accagtccagaggtcctccagcagacagagagggacagcttcctggagtggagacgagaa
ctggcagagcttgaagaggagcagaaaatgattctcaccccttttgagaggaatttggat
ttctggagacagctctggagagtgattgagaggagtgacgttgttgttcagattgttgat
gccagaaacccattgctatttcgttgccctgacctggagtgctatgtaaaggaggtgtcc
cggtacaaggtgaacttgctgctggtgaacaaggctgacctgctgacccggcagcagcgg
aggatttgggccagatacttccagagagagggcctccgcgctgtgttctggtccgcactg
gtggagaacgagaggctggaggcagaggagaagggaatggaagtggaggagcaggaggat
gaaaagagcgaagcagaggatgaagaggagggaatgccagacaacgacaatgtgagccga
agacgggaggtagaggataacaaggaagagagtgaggaggaagaaaatgaggagagtgat
atggaagaggagcagcagagcggggagcagtttaaagactgcgtagcagagggagactgg
cagacggcatcagagggtgaggaggtatcagagggtgaggagatatcagagggtgaggag
gcatcagagggtgaggaggcagacgacgaagagagtatagatggctccacccacggctcc
gccttccacaactccagtcgcctgctgaccaaagatgagctgctggccatatttaaggct
gctcacgatgggccaacgttgaaagagggcgagctcacagtggggctggtggggtatccc
aatgtgggcaaaagttccaccatcaacaccattctgagaaataagaaggtgtccgtctca
gtcacgcctgggcacaccaagcactttcagacgctgtacgtggagccgggtctgtgtctg
tgtgactgccctggcctggttatgccctcctttgtgtccactaaagctgagatgatctgc
tgtgggatcctgcccatcgaccagataagagaccatgtgcctgccatctcactcgtgtgt
cagactattcctcgggatgtgctggagggcacctatggcatcaacatcatccgcccacga
gaagacgaggaccccgaccgcatacccaactatgaggagctactgatggcctatggatac
atgaggggcttcatgacaacacacggacaacctgaccagtcgagatcagcccgttacatc
ctcaaggattacgtcgttggaaaactgctgtactgccaccctcctccccacatcagtgct
gcagacttccagccccagcacagcaagttccagtccggagatgcagacggtgaagactcc
aagataggcaacaaaccgagcaaagtcaagaggcacgagaatctggtcgacaagaacttc
ttccatcaggagaatgttcgggcgctcaccaagggggttcagtctttcatgggttacaag
gaaggcagcataggacagcgtgaactggtaaatcaggggaaacctggcttagaacagcct
gtgggcaaaccctggaagaagcatggcaacaggaacaagaaagagaaagtacgccgactc
accaagcacctggatgcctga
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