Coregonus clupeaformis (lake whitefish): 121533710
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Entry
121533710 CDS
T08357
Name
(RefSeq) ephrin-A2-like
KO
K05462
ephrin-A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121533710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121533710
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121533710
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121533710
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121533710
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121533710
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121533710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
121533710
NCBI-ProteinID:
XP_041695812
LinkDB
All DBs
Position
20:complement(15971526..16104365)
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AA seq
208 aa
AA seq
DB search
MDKNYLAFQMELTLMVVALLSWVAVWADDSKIISDRYAVYWNSTNPRFLHGEYTVEVAIN
DYLDIYCPHYEDPLPQERMERYILFMVNYDGYTTCDHRMKGFKRWECNRPQSPNGPLKFS
EKFQLFTPFSLGFEFRPGHEYYYISSPHPNLVGKPCLKLKVYVRPTNDSVYESPEPFLTD
DSTGGCYMAAPCLSLMLAMLLTLLLSCS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaactatttagcttttcaaatggagttgacacttatggttgttgccctctta
tcttgggtcgcggtatgggctgacgatagcaagattatatcagacagatatgcagtctac
tggaacagcacgaaccccaggtttctccatggggagtacaccgtggaggtggccatcaac
gactacctggacatctactgcccccactatgaggacccgctcccccaggagcgcatggag
cgttacatcctcttcatggtcaactacgacggctacaccacctgcgaccaccgcatgaag
ggcttcaagcgctgggagtgcaaccggccacagagccccaatggaccgctcaagttctcc
gagaagttccagctcttcacccccttctcgctaggcttcgagttccggccgggtcacgag
tattactatatctcgtctccacaccctaaccttgtcgggaaaccctgcttgaagttgaaa
gtctatgtcaggcccacaaatgactcagtgtatgagtccccggagcccttcctgacagac
gacagcaccggtggctgttacatggccgctccgtgcctctcccttatgctggccatgctg
ctcacgctactcctgtcctgctcatag
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