Coregonus clupeaformis (lake whitefish): 121534233
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Entry
121534233 CDS
T08357
Name
(RefSeq) ephrin-A2
KO
K05462
ephrin-A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121534233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121534233
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121534233
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121534233
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121534233
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121534233
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121534233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
121534233
NCBI-ProteinID:
XP_041696764
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All DBs
Position
22:1752455..1784724
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AA seq
227 aa
AA seq
DB search
MMLCVTGLSSVRWMARPGQRSVCTCVTQMVLMCLTVLSSCLSVWAEDQITFDHHAVYWNS
TNPRFHHDYRVAVSINDYLDIYCPFYTNGPPAHGRMERYILFMVNHEGYTSCQHRMRGFK
RWECNRPTGHDGPLRFSEKFQLFTPFSLGFEFRPGHEYYYISSPHPNHVGRPCLRLKVYV
RPPGSSGFESPEPFLTDGGPDWVPESLLAPALIPSLASLLLGFLSSL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgtgtgtaactggtttgagcagtgtgagatggatggctcggcctggtcagagg
agtgtgtgtacgtgtgtgacgcagatggttctgatgtgtctgaccgtcctgtcgtcctgt
ctgtccgtctgggctgaagaccaaatcacctttgaccaccatgctgtctactggaacagc
actaaccccaggttccaccatgactacagggttgcggtcagtataaatgactacctggac
atctactgtccattctacaccaacggccccccggctcacggtcgaatggaacgctatatc
ctgttcatggtcaaccacgaggggtacacttcctgtcaacacaggatgagggggttcaaa
cgctgggagtgcaaccgtcctaccggtcatgacggacccctgcgcttctcagaaaagttc
cagctgtttacgcctttctccctgggctttgagttcaggccggggcacgaatactactat
atctcttctcctcatcccaaccatgtagggaggccgtgtctgaggctgaaggtgtatgtc
agacccccgggcagttcagggtttgaatctccagagccctttctgactgatggaggtcca
gactgggtcccagagtccctgctagccccagccctaatacccagcctagcctcactgcta
ctgggcttcctctcatcgctgtga
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integrated database retrieval system