Coregonus clupeaformis (lake whitefish): 121534912
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Entry
121534912 CDS
T08357
Name
(RefSeq) phakinin-like
KO
K10379
phakinin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121534912
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Others
121534912
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC22_CC
AAA_13
Sec8_N
Alpha-2-MRAP_C
DUF5798
ATG17_like
DUF1664
Sec66
FKBP15
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
121534912
NCBI-ProteinID:
XP_041697463
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Position
21:11018368..11024591
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AA seq
439 aa
AA seq
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MPLPRRRSSFLGQPTAAERPGSASTRAGTAGITTAPRGVFVGTAPTSSASSLGTRVSRRA
LGISSVFLQGLRSTAAPVMPRGAGAGGRQHPGGAESLNACLMEYRDKVRALELLNQQLEE
QIRQCLDRKASSAGAWGPLRQDWEDVYRQVSESILDNARLMLQTENVQANAEDFKDRYEN
EQPFRKVVEEEISSLYKVIDNANLTKSDLESQMDSMRAELRDLARNHEEDVRVLYNQMAG
HEVDEPDAPIETNLDQILAYIRSHWERVIEKNRAETDAYLEFKQAESVGCKLSREEEELE
SLKTECNDAGCKIQSLQAETESIRALKRGLENSLNDAKHWHDIELQNLGSVIGKLESELG
DVRGDIEQQRCDYETLLGNKMRLELEIGTYHGILDGEESRYHPSMCTGASEPEGRQTPLP
PHSEPCGSSAPQGSNTSSH
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgccaagacgtcgatcctccttcttgggccagcccaccgctgcagagcgcccg
ggtagcgccagcaccagggctggcaccgcgggcatcaccacagccccccggggcgtcttt
gtggggacagcccccacgagcagcgcgtccagcctgggtacgcgcgtgtcgcggcgcgcc
ctgggcatcagcagtgtgttcctgcaggggctgaggagcacggccgcgcctgtgatgccc
cgcggggccggggctggtggcaggcagcaccccgggggtgctgagagccttaacgcctgc
ctgatggagtacagggacaaggtgcgtgccctggagcttctcaaccagcagctggaggag
cagatcagacaatgcctggatcgtaaggcgtccagcgccggagcctggggtcccctcaga
caggactgggaggatgtctacagacaggttagtgagtccatccttgacaatgccaggcta
atgctacagacagagaatgtgcaggccaacgctgaggacttcaaggaccggtatgagaat
gagcagcccttcaggaaagtggtggaggaggagattagctctctgtacaaggtgattgac
aacgccaacctgaccaagtcagacctggagagccagatggacagcatgagggctgagctc
cgagacctggcccgcaaccacgaggaggacgtgagggtgctctacaaccagatggcaggc
catgaggtggacgagccggacgctcccattgagaccaatctggaccagatactggcctac
atccgctcccactgggaaagagtcatcgagaagaaccgtgccgagaccgatgcctacctg
gaattcaagcaggcggagagtgtgggctgtaagctgagtcgtgaggaggaggagctggag
agtctgaagacggagtgtaatgacgctggctgtaagatccagagtctgcaggccgaaaca
gagtccatcagagcactgaagcgcggtctggagaactcactgaacgacgccaagcattgg
catgacattgagctgcagaacctgggatccgtcattggcaagctggagtcggagctgggc
gacgtccgcggcgacattgaacagcaacgctgtgactatgagacgttgctaggcaacaaa
atgcgcctggagctggagatcggcacctaccacggcatcttggatggggaggagagccgc
taccacccctcaatgtgcacaggtgcatcagagcctgaggggagacaaactccccttcct
ccccattcagagccctgcggcagctcagcaccccaaggctccaacacatctagtcactag
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