Coregonus clupeaformis (lake whitefish): 121535404
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Entry
121535404 CDS
T08357
Name
(RefSeq) ski-like protein isoform X1
KO
K18499
Ski-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121535404
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
Motif
Other DBs
NCBI-GeneID:
121535404
NCBI-ProteinID:
XP_041698375
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Position
21:complement(49763662..49798100)
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AA seq
749 aa
AA seq
DB search
MASTQTSLKTPFKDLTSFKGNMKQLYRERIEDVPIKKRLMAEMNLKRRSLDTLPQTPKVK
REAGEEQTQDGEVDPGMARSIEMDSRGVLQVCGAKALDLSPGLKHTLAAFTLSSARSLGG
PAAFSARSGHEASSSPGPGSCPGMAPLPSPPVLGGIPLLVPSDSSTELSHSLLEGESISC
FAVGGEKRLCLPQVLNSVLRHFSLQQINAVCDELYVYCSRCDGEQLHILKVLGILPFNAP
SCGLITLTDAQRLCNALLRPGAVLPSEPITKFPVQGLLETEASFQVEHQCLGKCQGLFVP
QFYAKPESPCIQCMECQLLFSPQKFVMHSHKSPDKRTCHWGFDSAKWPCYLQLGRKYLGT
AEEPQLKQLLEDVKDKFHYNRTGDKKVVEEDREVRSSPPEPLVSLNSKLADNDAATKAEG
QAQACLAFPHIKEEPSHPSYYLYTYDKMVAPNVSLRDQPEVSPEVLRVLLKHHYSRRLAH
DHEETAMDRHASPPAPPVVNDAKSQQCVVPAADRDRQQPVSMETSPGNKSSSAVAVAAVA
APGSKDVLSSVCEDDKERIVVEIVQMYSRQQEKLHSTLQKQLQLEMELEALRGGEAARLQ
QLAAEQCALQSELEAVHTEHAHRLGQVREEQRELEHRLEQLRQQGCVCDNTHQEERYANQ
LAELRGRLDGAEADREKLQEELRRERDAREKLERIISQLQQQMCQTASTSATTIATGSPS
PPPTPSSHPPHTEGHTAGPAEQQNGHAHK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggccagtacacagacaagtctgaaaaccccattcaaagacctgacctcgttcaagggc
aacatgaagcagctgtaccgtgagagaatagaagacgtgcctatcaagaagaggctgatg
gctgagatgaacctgaagcgccgcagcctggacaccctgccccagacccccaaggtgaag
agggaggctggggaggagcagacccaggacggggaggtggatccaggcatggctagatca
atagagatggacagtagaggtgtgctccaggtatgtggagccaaagctttagacctgagc
cctgggctgaaacacacgctggcagccttcaccctaagcagcgctcgctctctggggggc
ccagcagccttctctgcccgctccggccatgaagcatcctcctcccctggccctggctcc
tgccctggcatggcacctctaccctcccctccagtgctgggaggtatacccctgctggta
cccagtgacagctccacggagctcagccactcccttctcgagggagaatccatctcctgc
ttcgccgtcggtggggagaagcgcctctgcctcccccaggtgctcaactcggttctccgc
cacttctccttgcagcagatcaacgcggtgtgcgacgagctctacgtctactgctcgcgc
tgtgacggggaacagctccacatactcaaggtgctgggtattttacccttcaatgctccg
tcctgcggcctcatcaccttaactgacgcccagcgcctctgcaacgccctgctccgcccg
ggggccgtcctcccctctgaacccatcaccaagtttcccgtccaggggctcctcgagacg
gaggcgagcttccaggtggagcaccagtgtctgggaaaatgccagggtctgttcgttccc
caattctacgccaagcccgagtcgccctgtattcagtgcatggaatgccagctgctcttc
tctccgcagaagtttgtgatgcactctcacaagtcgccggacaagaggacctgtcactgg
ggctttgactcagccaaatggccatgctacctgcagctggggaggaagtacctggggacg
gcagaggaaccgcagctcaaacagctgctggaggacgtgaaggacaagttccactacaac
cgaaccggtgacaaaaaggtggtagaggaggacagggaggtgagatcatctcctccagag
cctctagtttctcttaacagtaaactagccgacaacgacgcagcgaccaaggctgaaggc
caagcccaggcttgtctggcgttcccccacatcaaggaagagcccagtcaccccagttac
tacctgtatacatatgataagatggtggctcctaacgtgtctctgagggatcagccggag
gtcagccctgaggttctgagggtgctgctcaaacaccactacagtaggagactggcccac
gaccatgaagagactgctatggatcgccatgcctctcccccagctcctcccgttgtcaac
gacgctaagtctcagcagtgcgttgttcctgccgccgaccgggaccgccagcagccagtt
tccatggagaccagccccggcaacaagagttcttctgctgtagcggtagccgcggtagcg
gcgccggggagtaaagatgtcctgtcttctgtctgtgaggacgacaaggaaaggatcgta
gtggagatcgttcagatgtacagcagacagcaggagaagctgcactccaccctgcaaaag
cagctgcagctagagatggagttggaggcgctgcgtggaggcgaggctgccaggctgcag
cagctggcagcagagcagtgtgcgctgcagagtgagctggaggcggtgcacactgagcat
gcccacaggctggggcaggtgagggaggaacagagggagttggagcacaggctggaacag
ctgaggcagcagggctgtgtgtgtgataacacacaccaggaggaacgctatgctaaccag
ctggcagagctgcgtgggaggttggatggtgcggaggctgacagggagaagctccaggag
gagttgaggagggagcgggatgcccgggagaagctggagagaatcatctctcagctccaa
cagcagatgtgccagacggcctccacctcggccacaaccatcgctacagggagcccctct
ccgccccccaccccctcctcacaccccccccacacagagggacacaccgcaggccccgcc
gagcagcagaacggccatgctcataagtag
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