Coregonus clupeaformis (lake whitefish): 121535788
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Entry
121535788 CDS
T08357
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121535788 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121535788 (gabra4)
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121535788 (gabra4)
BRITE hierarchy
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
SAP130_C
Motif
Other DBs
NCBI-GeneID:
121535788
NCBI-ProteinID:
XP_041699014
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Position
2:complement(31943173..31974344)
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AA seq
556 aa
AA seq
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MVSAKKEMVTAMYPSYISTLFYFFCLTACVKRISGTIKKDERIYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRYEGPIDILRLN
NMMVTNVWTPDTFFRNGKKSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMKLVDFP
MDGHACPLKFGSYAYPKTEMIYTWTKGPQYSVEVPPESSSLVQYDLIGHTVSSEEVKSIT
GEYVVMTVHFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAEMERLKRKPLKCPP
APQTTPVKVKDMEEVLQHNPDTNGNLRKRMNYMSQQDGQNAESNSTAVARGVTREQPQSC
QSSSSKGATGGAIILPHSSPGLASQPNASSSTLSAMNTPPAPPTTPTIPANQTQPTADSS
LQDLLGPRLEHIQLMGKNEPKQSPCSQPTTTSTGGTSKIDKYARILFPVSFGAFNMVYWV
VYLSKDTMEAKFRGQI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtaactgcgatgtaccccagttacatttcgactctc
ttctactttttctgcctgactgcttgtgtaaagagaatctctggaacgataaaaaaggat
gagagaatatatcccgagaatttcacacgcattttagacagactactggacgggtatgac
aacagactgcgacctggatttgggggtccggtgacagaggtgaaaacagacatttatgtg
acaagttttgggcctgtctctgatgttgaaatggagtacaccatggacgtgttcttcaga
cagacatgggtggacaggaggctgaggtatgaggggcctatcgatatcctccgactcaac
aacatgatggtcaccaatgtgtggactcctgacaccttcttcaggaatggcaagaagtct
gtggcacacaacatgaccgcccccaacaggctgttccgcatcatgaagaatggcacgatt
ctttacaccatgaggttgactatcagtgcggagtgtcccatgaagcttgtggacttcccc
atggatggacatgcatgccctctcaagtttggaagctatgcataccctaaaacagagatg
atttatacctggaccaaaggaccacagtattcagtggaggttcccccagaatcctccagc
ctagtgcagtacgatctcattggccacactgtcagcagtgaggaggtcaagtcaatcaca
ggtgaatacgtggtgatgacagtgcacttccacttgaagaggaaaatgggctacttcatg
attcagacgtatatcccctgcatcatgacagtaatcctctcccaagtgtccttctggata
aataaagaatcggtcccggctcgaacagtcttcggcatcaccacggtcctgaccatgacc
acgttaagcatcagcgcgcgtcactccctccccaaagtctcctacgccacggccatggac
tggttcattgccgtgtgtttcgccttcgtcttctccgctctcatcgagttcgctgccgtc
aactacttcaccaacgcagagatggagagactgaaaaggaagccgctaaaatgcccgccg
gcgccccaaacaaccccagtgaaagtgaaggatatggaggaagttctgcagcacaaccct
gacaccaatggtaacctgcggaaacggatgaactacatgtcccagcaagatggccagaat
gctgagtccaacagcacagcagtggcaagaggggtaaccagggaacaaccccagtcttgc
caatcatcttcatccaagggtgcgactggcggcgccatcatcctaccacactccagcccc
ggccttgccagccaacccaacgcttcctcctcgaccctgtccgccatgaacacgcccccg
gctccacccaccaccccgacaataccagccaaccagacccagcccaccgctgactcctcg
ctccaggaccttctaggacccagactggagcacattcagctgatgggcaaaaatgagccc
aagcagtcgccatgctcccagccaaccaccaccagtacgggcgggaccagtaaaattgac
aagtacgcccgcatcctgttcccagtgtcctttggagcattcaacatggtgtactgggtg
gtttacttgtcgaaagacaccatggaggccaaatttagaggccaaatctag
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