Coregonus clupeaformis (lake whitefish): 121536007
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Entry
121536007 CDS
T08357
Symbol
znf827
Name
(RefSeq) zinc finger protein 827 isoform X1
KO
K27104
zinc finger protein 827
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121536007 (znf827)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121536007 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_16
zf-H2C2_5
zf-C2H2_4
zf-C2H2_6
zf-C2H2_15
DUF5810
Motif
Other DBs
NCBI-GeneID:
121536007
NCBI-ProteinID:
XP_041699216
LinkDB
All DBs
Position
22:964815..1049233
Genome browser
AA seq
1545 aa
AA seq
DB search
MPRRKQEQPKRLPSHVDSVEEGGPDGGCCPVEEDGGGGWYGNASDTRSESSYGGDIHDDH
ELFLRGGSSPTPSPDRPPEHPDTSTESSLGGCPTPVHSHHHHHHHHRASLELLSLGVDGG
VFSAQDTLSSVVSSLYGEAASEALGKPLSSNLRRLLEAGSLKLDGELLGRVRGGGGGGES
PPIGLAPALTLSPSSHHAQQLSALARKLAANNNNNNSGGSASVSPASIAMSTTAIKQEPC
DPFASVVAPSNGAGFVWVGVAGDGKWPPTGCSASGGGSSLSPDSAIQKLKAAANAVLQDK
NATVAASSTSSSSSSCSTVPTLGGGGSRGGTDDSVRFDAFTSPFSPQSASSTLAALSKKV
SERSHTSSTSSSSDHQHQPSPGSSFLSLVSMTSSAALLKEVAARAAGNLLADKMESPLGA
PAGGGAHQEDIKPLLDRNQNAGTPTGPQSTMDLLLPSTPKGRAKPSSQAGSPGEDGGKPF
QCPVCGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQ
CELCPFTSSRHFSLKLHMRCHQHFPRSGSASDGVKVKEEATTDTEGEGSLMGDYNPGESP
LQSDAGNQSSPGVSSHHVFIKEEPQERELSVLSPFTLCRDRERERPGSSGNSLDLSMGGV
GLGVGVRSSPGGGPTAASLFSPDITTKTATDLLMKLSAANQKEALKAPQSFHLKQEPRTE
EEEVRRSPRSQPSYSSFYQEHGAALGGTGPAEVTADSGGHRGPLKGREGSPMGNKNSLLS
QDINFKVASELLMKLSESNKDAAHYQKVTVKAEPMEVDPPSDPAPPPSHLLAFSTLRACE
KSEPMASLPEALSRPQKQDLFSQDISVKMASELLFQLSEKVSKANDHKDSNMVGISSPFL
DERFRQSPFSQRSKSSSPAEASSSARTALHDPEKVGGEPGGNGMSQGILSSQQLYPCPVC
GKVFGRQQTLSRHLALHTEERKYTCHLCPYAAKCRANLNQHLTIHSVKLVSTDAEQMVSA
VSTAEGRDGKTFPYYYSCHACGFQTGLNAQFVSHMSLHVDKEQWMFSLCCSACDYVCVEE
SDMKTHVSQGHAGLNSRSPLSETKSTSSSLSALSDSLNSSEGGELTHGNEELKNLLAPPS
SAGSQSSSSSHSGSGTEEKSEKGFECVFCNFVCKTRTMYERHLQIHLITRMFECDVCHKF
LKTPEQLLEHKKCHTVPTGGLKCPVCIYSTNRPAAMECHLKTHYKMEYKCRICQSVWRDQ
PALERHVREHRLGNHYKCEQCGYLSKTANKLIEHVRVHTGERPFHCDRCGYSCKRKDNLN
LHKKLKHAPRQTFGCTECPFTTTHPFIFSRHLKKHQGGGEGEEAGEEEFQAQLGGSLVGS
LRGGEPFLLGVGGGGDGSSGGSGSSSPLMILSASQALQSVALSLITGKHHRQQDVPPPAQ
RYLTATTTNGGGSSLFFPSPRHLYEQMGNCERAHLIPLTTLFTHRHRSTFHSPLSRLQRP
SSSSSPLFLSSTASSHSSSPPSPTSLKHSFLAYLGLGLKERAKTV
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaagcaggagcaacccaaacgcctgccttcacatgtggacagcgtcgag
gagggtgggcccgacgggggctgctgtcccgtggaggaggacggcggtggtggctggtac
gggaacgcctccgacacgcgctccgagtcgtcgtacggcggcgacatccatgacgaccat
gagctgttcctccgcgggggctcctcccccaccccctccccagaccgacctccggaacac
cccgacacgtcgaccgagagttccctggggggctgccctacgcctgttcacagccaccac
caccaccaccaccaccaccgggcctccctggagctcctgagcctgggggtggacggaggg
gtgttctctgcccaggataccctttcctccgtggtgtcctctctctatggagaggctgcc
tccgaggccctggggaaacccctgagcagtaacctgcggcgtctcctagaggctgggtca
ttgaagctggatggggaacttctggggagagtgagaggtgggggagggggaggagagtca
ccccctataggcttagccccagccctgaccctctccccctcctcccatcatgctcagcag
ctaagtgccctcgcccgaaaactggcggccaataacaacaacaacaacagtggaggctcc
gcctcggtctcgcctgcctctattgccatgtcgaccaccgccatcaagcaggagccctgc
gaccccttcgcctcggtggtcgccccgagcaatggcgccggcttcgtgtgggtgggagtg
gccggcgacgggaagtggcccccgacgggttgttccgcctctggcggcgggtccagccta
tcaccggactccgccatccagaagctgaaagcggcagccaacgcggttttacaggacaag
aacgccaccgtagcggcctcatctacctcctcttcctcatcctcttgctccacagtaccc
accctgggaggaggagggagccggggaggaacggacgactcggtacgcttcgatgccttc
acctcccccttcagccctcagtcggccagctccacgctagccgccctgtccaagaaggtg
agcgagcgctctcatacctcctccacctcctcatcatcagaccaccaacaccaaccctcc
cccggctcctccttcctctccctggtctccatgacttcctcagctgcgctcctcaaggag
gtggcggcccgggcggcagggaacctccttgctgataagatggaatccccgctgggggcc
ccagcaggaggaggggcccaccaggaggacatcaagcccctgctggacaggaaccagaat
gcagggacccccacagggccccagagcaccatggacctgctgctgccctccacccccaag
ggaagggccaaacccagcagccaagcaggttccccgggggaggacggagggaaaccattc
cagtgtccggtgtgtggcctggtcatcaagaggaagagctactggaagagacacatggtg
atccacaccggcctgaagagtcaccagtgtcccctgtgccccttccgctgcgcccgcaaa
gacaatctcaagtcccacatgaaggtccaccagcatcaggaccggggcgagacgttccag
tgcgaactttgccctttcacctcctcgcgacacttcagcctcaagctccacatgcgctgc
caccagcacttcccccgctccgggtctgcctccgacggggtcaaggtcaaggaagaggcc
accacggacacggagggcgaggggtcactcatgggtgactacaaccccggggagtcccct
ctccagtcggacgcagggaaccagagctcccctggagtctccagccaccacgtctttata
aaagaagagccccaggagagggagctgtcggtgctttcgcccttcactctctgcagggac
agggagagggagcgtcctggtagtagtggcaactccctggacctctcaatggggggagtc
ggcttgggggtgggggttcggtccagtcctggtggaggtccaacggcggcgtccctcttc
agcccggacatcaccaccaagacagccaccgacctgctcatgaagctctcagcggccaac
cagaaggaagccctgaaggctccacagtccttccatctgaagcaggaaccccggaccgag
gaggaagaggtacgaaggagccccaggagccagcccagctactcctccttctaccaggag
catggcgcggcgctggggggcacggggccagcagaggtcacagcagacagtgggggccac
aggggccccctgaagggacgggagggaagccccatggggaacaagaacagtctcctcagc
caggacatcaacttcaaggtggcgtctgagctgctgatgaagctgtcagagagcaacaag
gacgctgcccactaccagaaggtgacggtgaaggcagagcctatggaggtggacccgccc
agcgacccggcaccgcccccttctcacctgctggccttcagcactttacgtgcatgtgag
aagagcgagccaatggccagcctccctgaggcgttgtcccgcccccagaagcaagacctc
ttctcccaggacatatcggtcaaaatggcctctgagctcctcttccaactatcagaaaaa
gtcagcaaagccaacgaccacaaagacagcaacatggtgggcataagcagccccttcctg
gacgaacgcttcagacaatcacccttcagccagcgctccaagtcctcctcccccgcagag
gccagctcctctgctaggacagccctccacgacccagagaaggttggtggagagccgggg
gggaacgggatgtcccaggggatactaagcagtcagcagctctacccctgtcctgtctgt
ggcaaggtgttcggcaggcaacagaccctctccagacacctggctctacacacagaggag
cggaagtatacgtgtcacctgtgtccttatgcagccaagtgccgagccaacctcaaccaa
cacctgaccatccactctgtcaagctggtcagcaccgacgcagagcagatggtcagcgcc
gtcagcaccgctgagggacgagacgggaagaccttcccctattactacagctgccatgcg
tgtggtttccagacggggctgaacgcccagttcgtcagccacatgtctctccacgtggac
aaggagcagtggatgttctctctgtgctgcagcgcctgtgactacgtctgtgtagaggag
agtgacatgaagacccacgtcagtcaaggacacgcaggtctgaactcgcggagccccctc
agtgagaccaagagcacctcctcctccctgtcggccctcagcgattcgctcaacagttca
gagggtggggaactcacccacggcaatgaggagctcaagaacctgctagcccctccctcc
tctgcaggcagccaatccagctccagcagccactcgggatcaggaactgaagagaagtct
gagaaaggcttcgagtgcgtcttctgcaactttgtgtgcaagacgcggaccatgtacgag
cgccacctccagatccacctgatcacgcgcatgttcgagtgcgacgtgtgccacaagttc
ctgaagacacccgagcagctgctggagcacaagaagtgtcacaccgtccccaccggaggg
ctcaagtgccccgtctgcatttattccaccaatcggccggcggccatggagtgccacctg
aagacccattacaagatggagtacaagtgtcgcatctgccagtcggtgtggcgcgaccag
cccgcgctggagaggcacgtgcgcgagcatcgcctcggcaaccactacaagtgcgagcag
tgcggctacctgtccaagacggccaacaagctgatcgagcacgtgcgcgtgcacacgggc
gagcggcccttccactgcgaccgctgcggctacagctgcaagcgcaaggacaacctgaac
ctgcacaagaagctgaagcacgcgccgcgccagaccttcggctgcacagagtgccccttc
accaccacccaccccttcatcttcagccgccacctcaagaagcaccagggtggaggggaa
ggggaggaggccggcgaggaggagttccaggcccagctagggggctctctggtggggtct
ctgcggggcggggagcccttcctcctgggggtaggtggaggtggggatgggagtagcggg
gggagcggtagtagcagccccctcatgattctctctgcctcgcaggccctgcagtctgtc
gccctgtcactcatcacagggaaacaccaccgtcaacaggatgtcccgcccccagcccag
cgttatctgacagcgaccacaaccaatggcggaggctcctccctcttcttcccctcccca
cgccacctctacgagcagatgggaaactgcgagcgggcgcacctgatccccctcacaacc
ctgttcacccaccgccaccgctccacattccactcgcccctctccagactccagaggccc
tcctcctcctcctccccccttttcctctcctccaccgcctcctcccactcttcctctcct
ccctcgcccacctcactcaaacactccttcctggcttacctaggactgggactgaaggag
agagccaagacagtgtga
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integrated database retrieval system
