Coregonus clupeaformis (lake whitefish): 121536037
Help
Entry
121536037 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: kalirin
KO
K15048
kalirin [EC:
2.7.11.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121536037
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121536037
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121536037
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121536037
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: CAMK group
Trio family [OT]
121536037
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121536037
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121536037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_KALRN
Spectrin
Spectrin_6
PH
SH3-RhoG_link
SH3_1
PH_10
SH3_9
IQ_SEC7_PH
RHG20_PH
PH_19
SH3_2
MDM31_MDM32
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
121536037
NCBI-ProteinID:
XP_045062279
LinkDB
All DBs
Position
22:341492..384984
Genome browser
AA seq
1839 aa
AA seq
DB search
MGVLHEVMQGHQHVEGAWQHRKLRLHQRLQLCVFQQDVRQVLDWVEQHGEVFLNKHTGVG
KSLHRARALQKRHDDFQQVAQNTYTNAEKLLEAAGQLAQSGECEEGEIYSAAGDLELRMQ
AFIQRVEQRKLLLDLAVSFYIHTKELSAWMEGLQRQMAGEVCVCPDSVESLQALITQQQQ
QQANTQDASLSVIREGEDLILQLRPQGSSVGHVESVLQSLEEAQVQLEELFHQRKIRLDV
YLQLRILQQCSLEVSGEMEAWKQDLQKQAQDITTEKLTLAQPRLVEANQEKLALAQSRLV
DANPEGLTLAQQRIHRHMERRLAMNNMTYEVVQQGHDLQQYITEVQASGIELTAEGETDL
SSQVEGLQQLLQDKQKELHQIVEHTHTHLEQGLQLRHLQTQVNQVLGWISEGEVMLSSCM
VNSSSLSEAEQLQREHERLQQAIESLLHADSLQRTHQVALALQQRAELLVRAGHYDPEAV
RACAQTVALHWQTLMLRMEDRLKLVNASAAFYRTSQQVCGVLESLEQEYRRDEDWCGGGE
RQGSRGLPEHLLPLINKHMEQKEAFLKACTLARRNAEVFLKYIHRNSVTMATISGHSAGA
EVTGHSRVPEQQVKGILSELLQRENRVLHFWTLKKRRLDQCQQYLLFQSHAQQALDWLQQ
SGEHYLSTHTSPGATSAETQDLLAQHREFCVSAKHTQEKVHLLIQLAESMLGKGHSHRVE
LRRCVSTVDKRYREFSMRMGQYRNTLETALGGCTQDNKDLELELIPNSLSDSDPEVNLND
PNHEVSDEKRRTARKKEYIMSELLQTERVYVKDLQECIDTYLWEMTSGSEEIPIRIANKD
DVVFGNIQDIYEFHNSIFLKELENYEQLPEDVGHCFVTWADKFHMYVTYCRNKPDSSLLI
QQHGAGFFEEVQRRHGLANSISSALIKPVQRITKYQLLLKELLACCEEGKGEIKEGLDVM
LSVPKRANDAMHVSMLEGLEEGLEVQGELLLQDTFQVWDPKSLIRKGRERHLFLFELSLV
FSKEIKDSSGRTKYLYKSRLRTSELGVTEHIEGDPCKFALWVGRTPTSDNKTVLKASSLE
LKQEWVRSVRQVIQERRGHLRGALXEPIPLPKTPAPTLVRTRSINRRDTNEDADSLGDAS
SQPDTVSIASRTSQNTADSDKLSGGCELTVVLLDFSAGGAEELSVRCGQTVELVERSSER
SGWCLVRTTDHTPPQEGLVPMSALCLSHSHSTDMDGLMPAATNTATAGKEPYPVGSEVRS
DSVASLQSQTSLGSSPGGVSVSSPSGVSIGSPGVNVGSPGPKRSGSGTGNTLKRWLTSPV
RRLSQGKADSQGKKPPLRTRRRDNRPELATPLTANTHLKGKSREDSVQSGGEEELEEEPH
TPLPPPMEIIKDGNDPEDSEGSNQSDTETKNKAMRGRMFVVNEMVQTEKDYVKDLGVIVE
GFMSRLEVKGIPEDMRGKDLIVFGNIHQIYDWHQEFFLVELEKCLQDHDRLAELFIKHER
RLHMYVVYCQNKPRSEFVVTEYETFFEEVQKEISCRMSISDFLIRPIQRITKYQLLLKDF
LKYTSKAGMDCEEIERAVDLMSLVPKRCNDMMNLGRLQGYEGKLTSQGKLLQQETFCVWE
QDGGVLSRSKDRRVFLFEQIIIFSELLREGSSTPGYQYKKSIKVSYLAMQECVEGDPCKF
VLSSRGSAERFTLQAASPSVKQLWVSHITELLDTQSNFLSALQSPIEYQRKEGGGTNLLT
RPPSGFGPKASGRPPSVPPTPNGHNTHTQADGEAQDDEKLVLVTQDFSAVREDEITVLRG
ERVQILASNQHGQCLVYRPANTESPPAEGWVPRSVLFNH
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgggagttctgcacgaggtcatgcagggtcaccagcatgtcgaaggggcgtggcaacac
cgcaagctccgcctacaccagcgtctgcagctgtgtgttttccagcaggacgtacggcag
gttctggactgggtggagcagcatggagaggtgtttctcaataagcacaccggtgtgggg
aagagcctccaccgagcacgagcactgcagaaacgccatgacgactttcaacaggtggcc
cagaacacctataccaatgctgagaagctgctggaggcagcaggtcagcttgcccagtca
ggggagtgtgaggagggggagatctactctgctgctggggacctggaactccgcatgcag
gccttcatacagagagtagaacagaggaaactactgctggacctcgctgtctccttttac
atacacaccaaagagctgtcagcgtggatggagggtctccagaggcagatggcaggggag
gtgtgtgtgtgtcctgactcagtggagtctctacaggctcttatcacccagcagcagcaa
caacaggccaacacacaggacgcctcgctctctgtcatcagggagggagaggacctcatc
ctacagctcaggccccagggcagttcagtgggccatgtggaatcagtgctgcagtcgttg
gaggaggcccaggttcagctggaggagctgttccaccagaggaagatcaggctggacgtc
tatctgcagctacgcatacttcagcagtgctctctggaggtgtcaggggagatggaggcg
tggaagcaggacctccagaagcaggcccaggacatcaccacagagaagctaacgctagca
caaccgcggctagtggaagccaaccaggagaagctagcattagcgcaatcgaggctagtg
gatgctaacccagaagggctaacgttagcgcagcagcgcatacacagacacatggagcga
cggctagccatgaacaacatgacctatgaggtcgtccagcagggtcacgaccttcagcaa
tacatcaccgaagtacaggcctcaggtattgagctgacagctgagggggagactgatctg
tcctctcaggtggaggggctccaacagcttctacaggacaagcagaaggagctgcaccag
atagtcgaacacacacacacacacctggagcaaggcttgcagctacgccacctacagact
caggtcaaccaggtgctgggctggatcagtgaaggagaggtgatgttgtcttcctgtatg
gtgaactccagctctctgtcggaggctgaacaactacagagagaacatgagcgcctccaa
caggccatagagtctctgcttcatgctgactctctccagaggacccaccaggtggcgctg
gcgctgcagcagcgggcagagctgctggtaagggcgggccactacgacccagaggcagtg
agggcgtgtgcacagacggtggcgctacactggcagaccctgatgctgcggatggaggac
cgcctcaaacttgtcaacgcctccgcagccttctaccgcacctcacaacaggtttgtggt
gtgttggaaagcctggagcaggagtatcgtagggacgaggactggtgtggtggcggagag
cgacaggggagcaggggcctgccggaacacctcctccccctcatcaacaaacacatggaa
cagaaagaagcctttctcaaggcatgcaccctggccaggcgcaacgcagaggtcttcctc
aagtacatccaccgcaacagcgttactatggcaaccatctccgggcacagtgcaggagct
gaggtcactggtcactcccgtgtgcctgagcagcaggtcaaaggtatcctcagtgagctc
ctgcagagggagaacagggttctacatttctggactctgaagaagcgtcgtctggaccag
tgtcaacagtacctgctgttccagagccacgcccaacaggcgttggattggctgcagcag
agtggtgagcactatctgtccacacacacgtcgccaggggcaaccagcgcagagacccag
gacctgctggctcaacacagagaattctgcgtctcggctaagcacactcaggagaaggtg
cacctgctgatccagctggcagagagcatgctgggtaagggccactcccacagggtggag
ctacggaggtgtgtgtcgacggtggacaagcgctaccgagagttctccatgcgcatgggc
cagtaccggaacacactggagactgcactgggaggctgcactcaggacaataaggacctg
gagctggagctcatccccaacagcctctctgactctgaccctgaagtgaacctgaacgac
cccaaccacgaggtcagcgatgagaagaggaggactgccaggaagaaagagtatatcatg
tcagagcttcttcagacagagagggtgtatgtgaaggatctgcaggagtgtatcgacacc
tacctgtgggagatgaccagtggctctgaagagatccccattaggatcgccaacaaggat
gacgttgtctttgggaacatccaggacatttatgagttccataacagtattttcctgaag
gagctggagaactatgaacagctacctgaagatgtgggtcactgcttcgtcacctgggcg
gataagttccacatgtatgtgacgtattgtagaaataaaccagactccagccttctgatc
cagcaacatggggcaggcttctttgaggaggtccagaggaggcatggtcttgctaactct
atctcctcagcgctcatcaagccggttcagcgcatcaccaagtaccagctccttctcaag
gagttgttggcttgttgtgaggaggggaaaggtgagatcaaggaaggtctggacgtcatg
ctgagtgttccaaagcgagccaacgatgccatgcatgttagcatgctagagggtctggag
gagggcttggaggtgcagggagagctcctcctgcaggataccttccaggtgtgggatccc
aaatccctgatcaggaaaggccgggaacggcacctgttcctgtttgagctctcgctggtc
ttcagtaaagagataaaggactcctccggacgcaccaagtacctctacaagagcaggctg
aggacgtcagagttgggggtgacagagcacattgagggggacccctgtaagtttgctctg
tgggtgggccgtacccccacctcggacaacaagaccgtcctcaaggcctcatctctggag
ctgaagcaggaatgggtgcgtagcgtgcgtcaggtgatccaggagaggcgtggccatcta
agaggggcgctgnaggagcccatccccctccccaagacccccgcccccaccctggtccgc
acgcgcagcatcaacaggagagacaccaatgaggatgcagacagcctgggagatgccagc
agccagccggacaccgtctccattgcctcccgcacctctcagaacacagcagacagcgac
aagctgtccggtggctgtgagttgaccgtggtcctgttggacttctcggcgggcggtgcc
gaggagctgagtgttcgttgcggtcagaccgtggagctagtggagcggtccagtgagcga
tctggctggtgtctggtcaggaccacagaccacacccccccacaggagggcctggtaccc
atgagcgccctctgcctttcccactcccacagcactgacatggacggcttgatgcctgcc
gccaccaacactgccaccgctgggaaagagccctaccctgtaggttcagaggtcagatca
gactctgtagcgtctctccagtcccagacgtccctgggctccagtcctggtggtgtgtcc
gtcagttcccccagcggagtctctattggttctcctggtgtgaacgtgggctccccaggg
cccaagcggagcggttccggtaccgggaacacgttgaagcgctggctgaccagcccggtg
aggagactgagccagggcaaagccgacagccaggggaagaaaccaccgctacgcaccagg
agacgagacaaccggcccgagctagccacgccgctcaccgctaacacacacctgaaggga
aagagccgtgaagactctgtccagagtggaggagaggaggagctggaggaggagccacac
acgcccctcccacctcccatggagattattaaagatggcaacgaccctgaggactcagag
ggctccaaccagtcagacacagagacgaagaacaaagccatgagaggccgcatgtttgtg
gttaatgaaatggtgcagactgagaaggattatgtgaaagaccttggtgtcatcgtggag
gggttcatgtcgaggttggaggtgaaggggattccagaggacatgagggggaaggacctg
atagtgtttgggaacatccatcagatatacgactggcaccaggagttcttcctggttgag
ttggagaaatgtttgcaggaccacgaccgactggctgagctcttcattaaacatgagagg
cggctgcacatgtatgtggtctactgtcagaataagcccaggtcagagtttgtcgtcacg
gaatacgagaccttctttgaggaggtgcagaaagagatcagctgtaggatgtccatcagt
gactttctcatcagacccatccagaggatcaccaaataccagctactgctcaaggatttt
ctgaagtacacgtctaaagcagggatggactgtgaggagatcgagagagctgtggatctg
atgtctctggtgcccaaacgttgtaatgacatgatgaacctgggacgcctgcagggttac
gaggggaagctgacgagccagggcaagctgctgcagcaggagaccttctgtgtgtgggag
caggacggaggagttctgtcccgcagtaaagacagacgcgtcttcctcttcgagcaaatc
atcatcttcagcgagctgctccgtgaagggtcctccacacctggctatcagtacaaaaag
agcatcaaggtgagctacctggccatgcaggagtgtgtggagggggacccctgtaagttt
gttctgtcatctcgggggtcggcagagcgtttcaccctgcaggcagcgagcccctctgtc
aaacagctgtgggtctcacacatcactgagctactggacacacagagcaacttcctgtct
gctctgcagtctcctatagagtaccagaggaaggaaggtggggggacaaacctcctcacc
cgccccccctcgggcttcggccccaaagcatcaggccgacccccctctgtgcctcccacc
cctaacggacacaacacacacacgcaggcagacggcgaggcgcaggacgacgagaagctg
gtgctggtgacccaggacttcagtgcggtgcgtgaggatgagatcacggtgcttcgcggg
gaacgggtgcagattctggcgtccaaccaacatggccagtgtctggtctaccgaccggcc
aacacagagtccccacctgcagagggctgggtaccgcgcagcgtcctgttcaaccactaa
DBGET
integrated database retrieval system
