Coregonus clupeaformis (lake whitefish): 121536571
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Entry
121536571 CDS
T08357
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121536571
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121536571
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
DUF7645
Motif
Other DBs
NCBI-GeneID:
121536571
NCBI-ProteinID:
XP_041699890
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Position
2:complement(24692756..24696297)
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AA seq
271 aa
AA seq
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MYVGYLLDKEGSMYHQGPVRRSGINIPPQNFVSTPQYSDFTGYHHVPNMDTHAQSSGAWG
APYVAPREDWGAYSLGPPNTIPTPMNTSSPGQVSYCSPEYNPMHAPGSAVLQPPPDNISV
AQVSPDRERHNSSYQWMSKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIR
RKSELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDCSGGSVHSDPGSVSPLRIPASL
SPSDIHGSLYPPPGRNTMPSIRNIQQATVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgggatacctcttggataaagaaggcagcatgtatcaccaaggacctgtaaga
cgatcgggcatcaacatcccaccacagaactttgtttccacgccacaatattccgacttt
actggataccatcatgtgccaaacatggatactcacgcacagtcttcgggggcttgggga
gctccttatgtcgcaccgagggaggactggggcgcctatagtctggggcctcctaacact
attcctacgcccatgaacacctcctcgccgggacaagtttcctattgctcacctgaatac
aatcccatgcacgcgccagggtcagcagtattgcaaccacctccagataatatttctgtt
gctcaagtttccccggatagagaaaggcacaattcttcttaccagtggatgagcaaaacg
gtacaatcatcttctaccggcaaaacaagaacgaaggagaaatacagagtggtttacacc
gatcaccagagactggaactggagaaggaattccattttaatcgttacatcactatcaga
agaaagtcagaacttgcggggaaccttggcctttcagaacgacaggtgaagatctggttt
caaaatcgcagagccaaggagaggaaattaatcaaaaagaaaatgggatctgattgcagc
ggaggatcagtgcacagtgaccccggttcagtgagtcctctgcggataccagcttcactc
agtccgtcggatattcacggctctctctacccaccccccggaaggaacaccatgccatct
attaggaacatacagcaagctactgtcactcagtag
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