Coregonus clupeaformis (lake whitefish): 121537903
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Entry
121537903 CDS
T08357
Name
(RefSeq) extended synaptotagmin-1
KO
K28063
extended synaptotagmin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121537903
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
121537903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
C2_GRDP
cPLA2_C2
MP_p6
Motif
Other DBs
NCBI-GeneID:
121537903
NCBI-ProteinID:
XP_041701479
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All DBs
Position
24:17266271..17313680
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AA seq
1085 aa
AA seq
DB search
MPSVDASPSIGTGSGTAGLELPEEMQPPKPPGQHAVTVLWSFGKCLATLLPVYLAGYFGF
SISLVLFGLMVYIGWKHSRNEKVMRLRSAMYVLENERAYATARAFRSKQELPPWVNFPDV
EKVEWMNKILQQAWPFVGQYLEKLLVETIAPAIRASNTHLQTLSFTKVNLGEKAMKVVGV
KAHTEHDKRQVLLDLYISYAGDVEINVGIKKYFCKAGVNGIQLHGKLRVILEPLIGDVPL
VGAITMFFIHRPKLDINWTGLTNILDIPGLNAMSDTMIMDAIASYLVLPNRLTIPLVANL
HIAQLRSPLPRGVVRIHLLEAEELTAKDTVIKGIIDGKSDPYAVLRVGTQTFTSHTVDNN
LNPQWREMFEVIVHEVPGQELEVEVFDKDQNQDDFLGRVKMDLDVVHKARVLDEWFKLKD
VTSGSVHLRLEWLSLLSSADRLSEVIQRNRNMTCKTADPPSAAILSVYLERAQDLPRKKG
NKDPSPMVQLSVQDTTKESRTCYLTSDPVWEDAFTFYIQDPRKQELDIQVKDDDRALSLG
SLSIPLTRLLASPDLSMDQWFQLDNSGRIYINAVLRVLYLSEDASSPISPHPPSLGSGHG
DGGTTSEVAPGGVGGAPKPVPTRPQQTTPDSYFASEGVLRIHLVEASNLIAKDNFIGGMV
KGKSDPYAKIRVAGVTFRSHTIKENLNPYWNELYEIILTQLPGQEIQFELFDKDLDQDDF
LGRFKLNLRDIISPQFIDEWYTLNDVKSGRVHLVMEWLPTVSESARLDQILQYQAQQQYQ
NKAVPSAAVLFVYLERAHSLPLKMNGKEPKVGAEILLKAMSYKTKVCERSTSPQWDEAFH
FLVRDPKEELLIVKLSHSWGQALGMVVLPLREVLSQQGLVLDRWLSLDGALPESQILLRA
TLKMLNTQLAVCRSGVSSDSTEEGSEERDQVIHRRDTEPNLRHRSPFSQLGDQSPGQVKL
QIGYSIEENRLYIIVLSCRGLPACGSAKDGSNPYVSLILLPDKNRTTKRNTITKKRDLNP
EFNERFDFDFTLEECMQRRLDLTVKNNVSFMSRERELIGKLQLDLDQIDLENGDTQWYDL
VEETN
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgtggatgcaagtccgagtatcggcacaggctccgggactgcgggcttggaa
ttgcccgaagaaatgcagccacccaaacctccagggcaacatgctgtaaccgtgttgtgg
tcctttggaaaatgcctggctacacttttaccagtttatctggccggatactttgggttc
agtatcagcttggttctattcggtctgatggtctacatcggatggaaacacagcaggaac
gagaaagtaatgcgtctgcggtcagctatgtacgtattggagaatgagagagcatacgcc
actgcaagggcttttaggagtaaacaggaattacccccatgggtcaacttccctgacgtg
gagaaggttgagtggatgaacaagatcctgcagcaggcgtggccattcgttggtcagtat
ctggagaagttgctggtcgagaccattgctccagccatacgtgcatccaacacccacttg
cagaccctcagcttcaccaaagtcaacctaggggagaaggccatgaaggtggtgggagtg
aaggctcacacggagcacgacaagcggcaggtcttactggatctatacattagctatgca
ggtgatgtggagatcaatgtgggaatcaaaaagtacttttgcaaagcaggagtgaatgga
atacagctacatgggaaattgagggtgatcctggagcccctgattggggatgtgcctctg
gtgggagccatcaccatgttcttcatccacagacctaagctggacatcaactggactggg
ctgaccaacatactggatatccctggactcaatgccatgtcggacacgatgataatggat
gctatagcctcatacctggtcctccccaaccgcctcactatccccctggtggccaacctg
cacattgcgcagctccgctcccctctcccacggggagtggtgcgtatccacctattggaa
gctgaggagctgacagccaaggatacggtcattaaggggataatagatgggaagtcggat
ccgtacgctgttctgcgtgtggggacccagaccttcacatcacacaccgtggacaacaac
ctcaacccacagtggagagagatgtttgaggtgattgtccatgaagtgcctggtcaggag
ttggaggtggaggtgtttgataaagaccagaaccaggatgacttcctgggcagggttaaa
atggatctagatgtcgtgcacaaggccagagttctagatgagtggttcaagctgaaggat
gttacatcaggcagtgttcacctccgtctggagtggctctctctgctgtcctctgctgac
cgactcagtgaggttatccagaggaaccgaaatatgacctgtaagactgctgaccctccc
tctgcagccatcctgtctgtctacctggaacgcgctcaagacctgcctaggaagaagggc
aataaggaccccagccctatggtgcagctgtctgtacaggacacaaccaaggagagtagg
acctgttatctgacctctgaccctgtttgggaagatgccttcaccttctacatccaggac
cctcgcaaacaggaactcgacattcaggtgaaggatgatgaccgggccctgtctcttggc
agtctgtccatcccactgacccgtctgctggccagtcctgacctcagcatggatcagtgg
ttccagctggacaactctggccgcatctatatcaatgctgttctgagggtgctgtattta
agtgaggatgcctccagccccatatctcctcaccccccaagcctagggtcaggccacgga
gacgggggtaccacgtcagaagtggcccccgggggagtgggtggagcccccaaacctgta
cccacacgaccccaacagaccacccctgactcgtacttcgctagtgagggagtgctgcgt
atccacctggtggaggccagtaatctgatagccaaggataacttcatagggggcatggtt
aaggggaagagtgacccctacgccaagatcagggtagcgggagtcaccttccgcagccac
actatcaaagagaacctgaacccctactggaacgaactctacgagatcatcttaacccag
ctgccaggtcaggagatccagtttgagctgtttgataaagatctggatcaggatgacttc
ttgggcaggttcaagttaaacctgcgagacatcatcagcccacagttcattgatgagtgg
tacactctgaatgatgtgaagtcaggtcgggttcatctggtcatggagtggctccccaca
gtctcagagtccgccagactagatcagatcctgcagtaccaggcccagcagcagtaccag
aacaaggcagtgccatcggctgctgtgttgtttgtgtacctggagagagcccacagcctg
ccgttgaagatgaatggaaaggagccaaaagtcggggcagagattttgctgaaggccatg
tcatacaagaccaaggtgtgtgagcgctctacatctcctcagtgggatgaagctttccac
ttcctggttcgtgaccctaaagaggaactccttatagtgaagctgtcccacagctggggc
caggccctgggcatggtggtgttgcccctgagagaggtcctgtcacagcagggcctggtg
ctggaccgatggctcagtctggacggggccctcccagagagccagattctactgagggcc
acactcaagatgttgaacacccagctggcagtgtgtcgtagtggtgtgtccagtgattct
actgaggagggcagtgaggaaagagaccaggtcatacacagacgggacactgaaccaaac
ctacgacacagatcaccgttctctcaattaggtgatcagagccctggccaggtgaagcta
caaattggctactcaatagaggagaacaggctgtacatcatcgtcctctcctgcaggggc
ctgccagcttgtgggtctgctaaggatggctccaacccctatgtctccttaatccttctg
ccggacaagaacaggaccaccaagagaaataccatcaccaagaagagagacctcaaccct
gaatttaacgagaggtttgactttgacttcactctggaggagtgcatgcagagaagactt
gacctgactgtcaaaaacaacgtctccttcatgagcagggagagagagctcattggaaag
ttacagctagatcttgaccagatagacctggagaatggcgacacacaatggtacgattta
gtagaggagaccaattag
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