Coregonus clupeaformis (lake whitefish): 121538032
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Entry
121538032 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121538032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121538032
04121 Ubiquitin system [BR:
cclu04121
]
121538032
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121538032
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121538032
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121538032
Autophagy
Mitophagy
PINK1-Parkin associated proteins
121538032
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121538032
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
121538032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-rbx1
zf-RING_6
zf-Nse
zf-RING_UBOX
zf-C3HC4_4
U-box
zf-C3HC4_3
zf-RING_5
Sina_ZnF
zf-ANAPC11
zf-RING_10
Laminin_II
zf-RING_16
zf-TRAF_2
Sos7
Motif
Other DBs
NCBI-GeneID:
121538032
NCBI-ProteinID:
XP_041701704
LinkDB
All DBs
Position
24:complement(11618912..11626317)
Genome browser
AA seq
318 aa
AA seq
DB search
MGYDVTRFQGEVDEDLLCPICSMVLEEPVQAPHCEHAFCNACITQWFNQQQICPVDRSVV
TLAHLRPVPRIMRNMLSKLQIACDNAGFGCTATLRLDQLQSHLKDCEHNPKRPVNCEEGC
GLEMPKDEMCNHNCIKHIRGVVQQQQTKISELEKNAAEHKHQLGEQKRDIQLLKAYMRAI
RGANPNMQNLEESIEYNEILEWVNSLQPVRVTRWGGMISTPDAVLQAVIKRSLIDSGCPL
SIVNDLIENAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDM
ILEPGLVMIFAHGVEEIL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggggtacgacgtcaccaggttccaaggggaggtggatgaagacctgctgtgtcccatc
tgtagtatggtactggaggagccagtgcaggccccacactgtgagcatgccttctgcaac
gcctgcatcacccagtggttcaaccagcagcagatctgtcctgtggaccgcagcgtggtg
acactggctcacctccggcctgtgccccgcatcatgcgcaacatgctctccaaactccaa
atcgcttgtgacaatgccggcttcggctgcacagccacactgcggctagatcaactacag
tctcacctgaaggactgcgaacacaaccccaaaagacctgtcaactgtgaggagggctgt
gggctggagatgccgaaagatgagatgtgcaaccacaactgcatcaagcacatacgtggc
gtggtacagcagcagcagaccaagatctctgaactagagaagaatgctgcagagcacaaa
caccagctgggggaacaaaaacgggacatccagctgctaaaagcttacatgagagcaata
cgcggtgccaaccccaacatgcagaacctggaggagagcattgagtacaacgagatcctg
gaatgggtcaactccctccaacctgtgcgggtgacgcgctggggcgggatgatctccacg
ccagacgcagttctccaggcggtcatcaagcgttcactcatcgacagcggctgtcctctg
tccatcgttaacgacctgatcgagaatgcccacgaaaggaactggccacagggcctggcc
acgctagagacgcggcagatgaaccggcgctactatgaaaactatgtggccaagaggatc
cctggaaaacaggcggtggtggtgatggcctgtgagaaccaacacatgggagaggacatg
atcctagagcctggcctggtcatgatctttgcccatggggtggaggagatcttataa
DBGET
integrated database retrieval system
