KEGG   Coregonus clupeaformis (lake whitefish): 121539520
Entry
121539520         CDS       T08357                                 
Name
(RefSeq) signal recognition particle 54 kDa protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03060  Protein export
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    121539520
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cclu02044]
    121539520
Enzymes [BR:cclu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     121539520
Secretion system [BR:cclu02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   121539520
  Eukaryotic Sec-SRP protein
   121539520
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW CbiA nSTAND3 DUF2209 NPHP3_N AAA_17 AAA_33 ResIII MeaB SRPRB nSTAND_NTPase5 AAA_22 AAA APS_kinase MobB AAA_30 AAA_19 Zeta_toxin PduV-EutP ATP_bind_1 nSTAND_NTPase7 6PF2K Thymidylate_kin AAA_16 AAA_18 ArsA_ATPase
Other DBs
NCBI-GeneID: 121539520
NCBI-ProteinID: XP_041704012
LinkDB
Position
25:30649160..30667479
AA seq 504 aa
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRRMIQHSVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
NESFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
EVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDLEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRIARVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggtgttagctgacttgggaagaaaaataacctcggcgttgcgatcactgagcaatgcc
accatcatcaatgaggaggtattaaatgccatgctgaaggaagtatgtgctgccctccta
gaagctgatgtcaacatcaagttggtgaagcagctcagagaaaatgtcaagtcagccatt
gacctggaggagatggcctctgggctgaacaagaggagaatgatccagcattctgtgttc
aaggagctggtcaagctggtggatccaggggtcaaggcttggacacccacaaagggaaag
aataatgtcatcatgtttgtgggtcttcagggcagtgggaaaaccacaacatgttccaag
ctggcgtactactaccaaagaaaagggtggaaaacctgtttgatatgcgctgacactttt
agagctggtgccttcgatcagttgaagcaaaatgcaacaaaagccagaattccattctat
ggaagttacacagagatggaccctgtcgtcatagctgctgaaggtgtggaaaagtttaag
aatgagagctttgaaataattattgttgataccagtggtcgacacaagcaagaagattcc
ctttttgaggagatgttgcaggtttccaatgcagtgcaacccgacaacattgtgtacgtg
atggatgcctccattggtcaagcttgcgaagcacaggctaaggccttcaaagacaaagta
gaagttgcatccgttatagtgacaaagctagatggtcacgccaaaggtggtggtgctctc
agtgctgtggctgctactaagagtcccatcattttcattggtactggagaacacattgat
gacttggagccatttaagacacaacccttcatcagcaagctactgggcatgggagacatt
gaaggtttgatagacaaagtcaacgaactcaagctggatgacaacgaggagttgattgac
aagctgaaacatggtcagttcactctcagagacatgtatgagcagtttcagaacatcatg
aagatgggaccatttggccagatcatgggtatgatcccaggtttcggaacagacttcatg
agcaaaggtaacgagcaggagtccatggccaggttgaagaaactcatgacaattatggac
agcatgaatgaccaagaacttgacaacaaagacggcgcaaagctcttcagcaagcagccg
aaccgaattgccagagtggcgcggggttcaggggttgccaccagggatgtccaggagctg
ctcacccagtacaccaagtttgcccagatggtgaagaagatgggtggcatcaagggcctg
ttcaaaggtggtgatatgtccaagaatgtcaacccctctcagatggctaagttgaaccaa
cagatggcaaagatgatggacccaagggttctccaccatatgggtgggatggctggtctc
cagtctatgatgagacaattccaacagggtgcggctggcaacatgaaagggatgatggga
ttcaacaacatgtga

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