Coregonus clupeaformis (lake whitefish): 121540707
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Entry
121540707 CDS
T08357
Name
(RefSeq) harmonin
KO
K21877
harmonin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121540707
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
121540707
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GFIT
Motif
Pfam:
PDZ
USH1C_N
PDZ_6
PDZ_2
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
121540707
NCBI-ProteinID:
XP_041705683
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Position
26:36332645..36377286
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AA seq
564 aa
AA seq
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MERKVAREFKHKVELLIDNEAEKDYLYDVLRMYHKSMELSVLVGDLKLVINEPSRLPLFD
AIRPLIPLKHQVEYDLLTPKRSRKLKEVRLDRTHPEGLGLSVRGGLEFGCGLFISQIVKD
GQAGNSGLQMGDEIVRINGYSISSCIHEEVINLIKTKKTVSLKVRQFGMIPVKSSTEEPL
KWQFVDQFVSESGEKTRSVAGLVSMGGKEMKEKKVFLSLVGTKGMGVSISSGPTQQPGIY
VSNVKPGSLAAEVGLQIGDKIVEVNGVEFTNLDHKEAVRVLKSSRSLTITVLSGAGSELF
MTGEERLAVEARRELDRQELMQQKRVAMETNKIIKEQQEKERQRMMEISQKTAEEEERYQ
KEMEKIEAAEVKDNREWEEDCTPGEQPKTKSPSPAPPEINTPPTKSKSSDYEASSFQADD
NDDEEEEEEEEEEEEEEGRESFQKYVEDFDPHSMFSSEQIAGRDVRLLRIKKVGPLDLAV
EGGVDSPLGKLVVSAIYDGSSVDKHGGIVPGDEVMAVNGEILTDSSLTEGENSLNEAWNS
GGDWIELVIAVSPPKEYEDEETFF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaacgaaaagtagctcgagaatttaagcacaaggtggagctgctcattgacaatgag
gcagaaaaggattacctgtacgatgtcctgcggatgtaccacaagtccatggagctgtca
gtgttggtgggggacctgaaactggtcatcaacgagcccagccgcctgccgctgtttgat
gccatccggcccctcattcccctcaaacaccaggtggagtacgacctgctcacccccaag
aggtcacgtaagttaaaggaggtgcgtctggatcgtactcatcctgaggggctggggctg
agtgtaagagggggcctggagttcggctgtggactcttcatctcacagatcgtcaaggat
ggacaggctggaaacagtggcctgcagatgggagatgagattgtacgcataaatggatac
tccatttcttcctgtatccacgaggaagtcatcaacctcatcaagaccaagaagaccgtg
tcgctcaaagtcaggcagtttgggatgataccagtgaagagttccacagaggagcctctg
aagtggcagttcgtggaccagtttgtgtctgagtctggggagaagacgagaagtgtggca
ggcctggtgtccatgggaggcaaggagatgaaggagaagaaagtgttcctgagcctggtg
ggcaccaagggcatgggcgtcagcatctccagtggccccacacagcagcctggtatctac
gtcagtaacgtcaaacctggctctctcgctgctgaagtaggactacagattggtgacaag
atcgtggaggtgaatggggtggaattcaccaatctggaccacaaagaggctgtcagagtt
ctgaagagcagcaggagtctaaccatcacagttctttctggtgctggcagtgagttgttt
atgacaggcgaggagcgtctggcggtggaggctcgcagggagctggacagacaagagctg
atgcaacagaagagggttgccatggagaccaacaagatcatcaaggagcagcaggagaag
gagaggcagcgaatgatggagatttctcagaagactgctgaggaagaggaacgctaccag
aaggagatggagaagatcgaggctgcggaggtgaaggacaacagggagtgggaggaggac
tgtacccctggagaacaacccaaaaccaagagtccctccccggccccgcccgaaatcaac
accccacccaccaagtccaagagctctgactatgaagccagctcgtttcaggctgacgac
aatgatgatgaggaggaggaggaagaggaggaggaagaagaagaagaagaagggagagaa
agctttcagaaatatgtggaagactttgatccccactccatgttctcctcggagcagata
gctggacgagacgtgagactgctgagaatcaaaaaggttggaccacttgatctggccgtg
gaggggggagtagactcccctctgggaaagctagtggtatctgccatttatgatggaagc
tcggtagacaaacatggtgggatagtaccaggagatgaggtgatggctgtgaatggggag
atcctgactgactcctcactgacagaaggagagaactctctgaacgaggcctggaacagt
ggaggggattggattgagctggtgatagcagtgtcacctccaaaagaatacgaagatgag
gagacattcttctga
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