Coregonus clupeaformis (lake whitefish): 121542406
Help
Entry
121542406 CDS
T08357
Name
(RefSeq) ephrin-A1-like
KO
K05462
ephrin-A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121542406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121542406
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121542406
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121542406
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121542406
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121542406
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121542406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
121542406
NCBI-ProteinID:
XP_041707738
LinkDB
All DBs
Position
17:complement(641621..658121)
Genome browser
AA seq
237 aa
AA seq
DB search
MDLVWLVCLAVSFGTWLASAERHSVFWNSTNPNFLWDEYTVEVKINDYLDIICPHYTRGE
LPSQEAERYVLYMVEREDYEVCKPHSFDQLRWECSRPFAAHAPERFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGQECLRLKVDVVGLHGSGKAKADKGKDGAMEKAIDGGKIGGG
GGGGGGGVHNPSNRLPADDPAVLEPKVQKSVGSSGVQLVSLSVFFTLFPLLLSLLLH
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtgtggctggtatgtttggcagtgagcttcggaacctggttagcctctgca
gagagacacagcgtcttctggaatagcacaaacccaaatttcctatgggatgagtacaca
gtggaggtgaaaatcaacgactacctggacattatctgtccccactacacacgcggggag
ctgccgtcccaggaggccgagcggtatgtgctgtacatggtggagagggaggactatgag
gtgtgtaagccccactccttcgaccagctgcgttgggaatgttcccggcccttcgctgcc
catgcccccgagaggttctccgagaagttccaacgcttcacccccttcaccctgggcaag
gagttcagacagggagagagctactactatatctccaagccgctgcatcaccacggccag
gagtgtctgaggctgaaggtggacgtggttggacttcatggctctgggaaggccaaagct
gacaaaggaaaggatggagcgatggagaaagcgatagatggaggaaagataggaggagga
ggaggaggaggaggaggaggagtacacaacccctccaacaggcttccagcagatgaccct
gctgtgttggagcctaaggtccagaagagtgtgggtagttcaggtgttcagctggtctcc
ctgtcggtcttcttcaccctgttcccactcctactatccctgttactccactga
DBGET
integrated database retrieval system