Coregonus clupeaformis (lake whitefish): 121542717
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Entry
121542717 CDS
T08357
Name
(RefSeq) ephrin-A3
KO
K05462
ephrin-A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121542717
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121542717
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121542717
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121542717
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121542717
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121542717
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121542717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
121542717
NCBI-ProteinID:
XP_041708157
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All DBs
Position
28:complement(13570146..13637989)
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AA seq
217 aa
AA seq
DB search
MALATLSLCVLTLTWANLYQVCANRHAVHWNSSNIHLRREGYTVQVNVNDYLDIYCPHYN
DSQRVVGTGEQYILYMVSYRGYRTCDPQLGFKRWECNRPHAPIKFSEKFQRYSAFSLGYE
FHVGQEYYYISTPTHHHGRSCLRLRVYVCCSTVSDVDVEPGQPEPDYTLRPDIKIQDIDD
FNPEVPKLEKSVSGSSPSRDRLLITIATLLLAAITIS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgcaacgctgtctctctgtgtgctaactctcacctgggcaaacttgtaccag
gtgtgtgccaacaggcacgcggtgcattggaacagctccaatatacatctgcgtagggag
ggctacacggtgcaggttaatgtgaacgactacctggacatctactgtccccactacaat
gacagccagcgtgtggtgggcaccggggagcagtacatcctctacatggtcagctaccgt
ggttacaggacatgcgacccccagctgggcttcaagaggtgggagtgtaaccgcccccac
gcaccaatcaaattctcagagaagttccagcgctatagcgccttctccctgggctacgag
ttccacgtgggccaggagtattactacatctctacgcccactcatcaccatggtcgcagc
tgcctcagactgagagtgtatgtctgctgctccacagtgtctgatgttgatgttgaacca
ggacaaccagaaccagactacacactcagaccagacatcaaaatccaggacatcgatgat
tttaaccctgaggttcctaaactggagaagagcgtcagtggaagcagcccatctagggat
cgcctactcatcaccatagcaacgctcctccttgctgccatcaccatctcctag
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