Coregonus clupeaformis (lake whitefish): 121542718
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Entry
121542718 CDS
T08357
Symbol
efna1b
Name
(RefSeq) ephrin-A1b
KO
K05462
ephrin-A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121542718 (efna1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121542718 (efna1b)
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121542718 (efna1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121542718 (efna1b)
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121542718 (efna1b)
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121542718 (efna1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121542718 (efna1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
121542718
NCBI-ProteinID:
XP_041708158
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All DBs
Position
28:complement(13473825..13485586)
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AA seq
234 aa
AA seq
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MDLVWLVCLAVSFGTWFASAERHSVFWNSTNPNFLWDEYTVEVKINDYLDIICPHYTRGE
LPSQEAERYVLYMVEREDYEVCKPHSFDQLRWECSRPFAAHAPERFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGQECLRLKVDVVGLHGSGKAKADKAKDGAMEKAIDGGKGKIG
AGGGVHNPSNRLPADDPAVLEPKVQKSVGSSGVQLVSLSVFFTLFPVLLSLLLH
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtgtggctggtatgtttggcagtgagcttcggaacctggttcgcctctgca
gagagacacagcgtcttctggaatagcacaaacccaaatttcctatgggatgagtacaca
gtggaggtgaaaatcaatgactacctggacattatctgtcctcactacacacgcggggag
ctgccgtcccaggaggccgagcggtatgtgctgtacatggtggagagggaggactatgag
gtgtgtaagccccactccttcgaccagctgcgttgggaatgttcccggcccttcgctgcc
cacgcccccgagaggttctccgagaagttccaacgcttcacccccttcaccctgggcaag
gagttcagacagggagagagctactactatatctccaagccgctgcatcaccacggccag
gagtgtctgaggctgaaggtggacgtggttggacttcatggctctgggaaggccaaagct
gacaaagcaaaagatggagcgatggagaaagcgatagatggaggaaagggaaagatagga
gcaggaggaggagtacacaacccctccaacaggcttccagcagatgaccctgctgtgttg
gagcctaaggtccagaagagtgtgggtagttcaggtgttcagctggtctccctgtcggtc
ttcttcaccctgttcccagtcctactatccctgttactccactga
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