Coregonus clupeaformis (lake whitefish): 121542810
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Entry
121542810 CDS
T08357
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121542810
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
121542810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
URGCP_GTPase
AAA_16
DUF6079_1st
AAA_30
AAA_18
Motif
Other DBs
NCBI-GeneID:
121542810
NCBI-ProteinID:
XP_041708298
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRDRDVGPLGQNLSGPSRDREYVPRERRDGSEEPPGPLVQ
KTPIILAKPPGERSKPSQSVPISGGQALEKPIMLIKTREDGVKPGTPPEVAPLASGSGAS
KLEREGQRPTQPVYQIQNRGMGAAASSGAVDPVIGQTKLVPPEKMKHSIKLVDDQMNWCD
SAMEYLRDQTDMLVVGVIGLQGTGKSTIMSLLSANTPEEDQRGYVFRAQTQEIKERGGNQ
STGIDFYITQERVIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQITAFLF
TVCHVVIVIQDWFTDINLYRFLQTAEMLKPSTPSASHDSTGSSGNEEGSEYYPHIVFLQN
KSSRDEFCPRNLKKMHMAVDKLMAHSHLKYKGTLSMLDCNIFPGLGRDYLETEVNMFLLP
LMENEGEDALTKAGSGAAPLFSLLPGYRGHPTFSSQVSKLRSQILAMSRCQLSHTILTEK
NWFHYAARIWDGVKKSSALSEYSRLQA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatccggccacagtcaacccggcatgtacggacagggaaggaggagaaggcga
cgccgagacagggatgtgggtcccctggggcaaaacctctctggtcccagtcgagatcgg
gaatatgtccccagagaacgcagggatggcagtgaggagcctccaggaccactcgttcag
aagacccccatcatactggccaaaccccctggagaacgttccaagccttcccagagtgta
cccatcagcggaggccaggccctggagaagcccatcatgctcatcaagaccagggaggac
ggggtgaaaccagggaccccccctgaggtggctcctctggcctctggctctggggcctca
aagctagagagggagggccagcgccctacccaacctgtctaccagatacaaaacagaggc
atgggagcagctgcttccagcggtgctgtggaccctgtgattggccagaccaagctcgtc
ccccctgagaagatgaagcacagcatcaagctggtggacgatcagatgaactggtgtgac
agcgccatggagtacctaagggaccagacagacatgttggtagtgggagtcattggcctg
cagggaacagggaaatccaccatcatgtctctcctgtctgccaacacacctgaagaagac
caaaggggctatgtgttcagggcccagactcaggagatcaaagagagaggggggaaccaa
agcactggtattgacttctacatcactcaggaaagagtcatcttcttggacacacagccc
attctcagtccctccattttggatcacctcatcaacaacgaccgcaagctgcctccagag
tacaacctccctcacacctatgtggagatgcagtctcttcagatcactgccttcctgttc
acagtgtgccacgtggtcattgtgattcaagactggttcactgatatcaacctctacagg
ttcctccagacagcagagatgctgaagccgtccaccccctcagccagccacgacagcact
ggctcctctggcaacgaagagggatcagagtactaccctcacatagtgttcctgcagaat
aaatctagtcgagatgagttctgtcccagaaacctgaagaaaatgcacatggcagtggac
aagctgatggcccactcccatctgaaatacaaaggcactttgtccatgctggactgtaat
attttccctggactgggccgggactacctggaaacagaggtcaacatgttcctgctgccc
ctcatggagaatgagggggaggacgcgctaaccaaagcagggtctggggccgcccctctc
ttctctctcctcccggggtacagaggacaccccaccttctcctctcaggtctccaagctc
cgcagccaaatcctggccatgtcccgctgtcagctgtcacacaccatcctcacagagaag
aactggtttcactacgcagctcgcatctgggacggggtaaagaagtcctcagccctgtct
gaatacagccgtctacaggcctag
DBGET
integrated database retrieval system
