Coregonus clupeaformis (lake whitefish): 121543402
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Entry
121543402 CDS
T08357
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121543402
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121543402
BRITE hierarchy
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121543402
NCBI-ProteinID:
XP_041709174
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Position
28:complement(26782048..26817277)
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AA seq
597 aa
AA seq
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MGKTGKSTVDLNSPTEVKQAVPFEVMETVAPTDGEEKEEVLPDRGSWKGKFDFLLSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLVFAGIPLFLLETSLGQFTSVGGLGVWTKLM
PMMKGVGLASVVLSFWLNIYYIIIIAWALYYLFNSFRADLPWEGCDNPWNTEKCFSNYSL
TDTTNLTSAVTEFWERNMHQLSSGLEEPGEVRWPLAGTLALSWILVYFSIWKGVEWTGKV
VYFSATYPYFMLFILFFRGVTLPGAKEGILFYITPDFNKLLKSEVWLDAATQIFFSYGLG
LGSLIALGSYNSFNNDVYRDSLIVCCINSFTSMFAGFVIFSIVGFMSYITKKPVQELAAS
GPGLAFLAYPQAVTQLPMSSLWAILFFSMLMMLGLDSQFCTVEGFITALMDEFPMVLRKR
KKVFILGVCLMSFLIGFSNITQGGLYVFKLFDYYSASGMCLLFLVFFETVSISWFYGADK
FYGDIEEMIGYRPCGWWKLCWKFFTPAICLGVFTFSAIEMTPLTLGKYVYPAWGQGIGWV
MSLSSMVLVPGYVIYMFCTSKGSIKQRWHKMTTSAPWEHAAVTHQNSHTGSVGEAAV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggggaagactggtaagagcaccgtggacctcaactccccaacagaggtcaaacaggcc
gtcccattcgaggtcatggagacggtggcgcccacagatggcgaggagaaggaggaagta
ctccctgacaggggctcctggaagggcaagtttgacttcctgttgtcgtgcgtgggctac
gccatcggcctggggaatgtctggcggttcccttatctgtgcggcaagaatggaggaggg
gctttcctgatcccatacttcctcaccctggtgtttgctggcatacctctgttcctgttg
gagacgtcactgggccaattcacctcggtgggggggctgggggtgtggaccaaactaatg
cctatgatgaaaggggttggtctggcctcagtggtgctctccttctggctcaacatctac
tacattatcatcatcgcctgggccctctactacctcttcaactccttcagagcggatttg
ccgtgggagggttgtgataacccctggaacacagagaaatgtttctccaactacagtttg
acagacaccaccaacctcaccagtgctgtcactgagttctgggagcggaacatgcaccag
ctgtccagtggtctggaggagcctggtgaggtgcgctggcccctggctggaactctggcc
ttgtcctggatcctggtctacttctctatctggaaaggagtggagtggacagggaaggtg
gtctatttctccgccacgtacccttacttcatgctgtttatcctgtttttccgtggggtc
actctccctggggccaaggagggcatcctcttctacatcacccccgacttcaacaaactc
ctcaagtctgaggtgtggctggacgctgccactcagatcttcttctcctatggactgggt
ctgggttcgctcatcgccttgggaagttacaactccttcaacaacgatgtgtacagggac
tccctcatcgtgtgctgtataaactccttcactagcatgtttgcgggctttgtcatcttc
tccattgtgggcttcatgtcgtacatcaccaagaagcctgtccaggagctagctgcctca
ggcccaggcttggcgttcttggcttatccccaggccgtgactcagctgcccatgtcctcc
ctgtgggccatcctgttcttctccatgctgatgatgctggggctggacagccagttctgt
actgtggagggcttcatcacagctctgatggatgagttccccatggtgctgaggaagagg
aagaaggtcttcatccttggcgtctgtctaatgtccttcctcatcggcttctccaacatc
acacagggtggtctgtacgtcttcaagctgtttgattactattctgccagcgggatgtgc
ctcctcttccttgtcttcttcgaaaccgtctccatttcctggttctatggagctgataag
ttctatggggacattgaagagatgatcggctatcggccctgtggctggtggaagctctgc
tggaagttcttcactccggcaatctgcctgggagtgtttaccttcagtgccattgagatg
acccccctgaccttggggaagtacgtgtacccggcatgggggcaggggattggctgggtc
atgtctctgtcatccatggttctggtgccgggctatgtcatctacatgttctgcacctcc
aagggcagtatcaaacagcgttggcacaagatgaccaccagcgcaccttgggaacatgct
gccgtcacacaccagaattcacacacaggaagtgtgggcgaagccgccgtctaa
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