Coregonus clupeaformis (lake whitefish): 121543467
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Entry
121543467 CDS
T08357
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
121543467
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121543467
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
121543467
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
FORS blood group (Forssman antigen)
121543467
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
121543467
NCBI-ProteinID:
XP_041709264
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Position
28:complement(32127599..32131949)
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AA seq
363 aa
AA seq
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MRFCTNIRPSIALPVLGILLFGVLVLTYCYSSFGEMKNKDVRVLEVLGLCQQDPVNFRRE
NCSCRTRDMLAPQGLLYKQPSVLKGRTNVVAVTPWLAPIVWEGTFNPLVVDSIYKPMHLS
IATTVFAVGKYVRFLRDFLETAEKHFMVDFKVHYYIFTDRREDVPAVVLAPGRQVTIIPV
TGSNRWQEISSRRMEMIQTTIENQISKEVDYIFCLDVDTKFYGRWGAETLSRLVAALHPG
YYEQTHEHYPYERRPASRAYIPAGEGDYYYGGATIAGYVGDVHKLAKYCREQLEADAANS
IEAAWQEESHLNRYLLYNKPTKILSPEYLWQDFKAKTNEVQIIRFSQVNKNYAEVRPNVK
KRK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttgcacaaatatccgtccttccatcgctctgccagttcttggaatcctactt
tttggagtcctggttttaacatattgttactcatcatttggtgagatgaaaaataaggac
gtcagagttctagaagttttggggttgtgtcagcaggaccctgttaatttcaggcgggaa
aactgtagttgtaggacccgggacatgctggccccacagggactcctgtataagcagccc
agtgtgttaaaggggcgcaccaatgtggtagctgttaccccttggttggcacctattgtc
tgggaaggcacttttaatcccttggttgttgacagcatttacaagcctatgcacctcagc
atcgccacaaccgtatttgctgttggcaagtatgtgcgcttcctgcgtgacttcctggag
actgccgagaagcatttcatggtggatttcaaagtgcattactacatcttcactgaccgg
agggaagacgtgccagcggtggtcctcgctcccggtagacaggtaaccatcatcccagtc
actggctccaaccgctggcaggagatctcctccaggaggatggagatgatccagaccacc
atcgagaaccagataagcaaggaggtggactacatcttctgcttggatgtggacacaaag
ttctacggccggtggggggcagaaacactgagcaggctggtggccgcacttcacccgggt
tactatgagcagacccacgagcactacccttacgagcgccgtcctgcctcgcgggcctac
atccccgcgggggaaggagactactactatggaggcgccaccatcgctggctatgtgggg
gacgtgcacaagctggcaaagtactgccgtgagcagctggaggccgatgccgccaactcc
atcgaggcagcatggcaggaggaaagccacctgaacagatatctcctttacaacaagccc
actaagattctgtctccagaatacctgtggcaggacttcaaggccaagaccaacgaggtg
caaataatccgcttttctcaggtcaacaagaactacgcagaggttcggcccaatgtaaag
aaaagaaagtaa
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