Coregonus clupeaformis (lake whitefish): 121544245 Help Entry 121544245         CDS       T08357                                  Name (RefSeq) calpain-1 catalytic subunit   KO K01367   calpain-1 [EC:3.4.22.52] Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04141   Protein processing in endoplasmic reticulum cclu04210   Apoptosis cclu04217   Necroptosis cclu04218   Cellular senescence cclu04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     121544245  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     121544245    04217 Necroptosis     121544245    04218 Cellular senescence     121544245  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     121544245  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:cclu01002]     121544245 Enzymes [BR:cclu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      121544245 Peptidases and inhibitors [BR:cclu01002]  Cysteine peptidases   Family C2: calpain family    121544245 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III CAPN13-like_C_EFh EF-hand_1 EF-hand_7 EF-hand_6 EF-hand_8 EF-hand_5 Motif Other DBs NCBI-GeneID:  121544245 NCBI-ProteinID:  XP_045064930 LinkDB All DBs Position 29:complement(5202711..5240429) Genome browser AA seq 708 aa AA seqDB search MPPPGVCMSIMQERHKKEGVGSLANPEKHSNQDFQQLKQYCLVRGVRYIDEMFPPDHNSI GDGLVSPDDMARVVWLRPAKMVRNPDFTVDGISRFDFGQGIVGDCWFLASIGALTFQKHI LEQVVPLNQSFKDDYCGIFHFRFWRFGRWVDVVIDDKLPTVDGRLIFVHSKTPNEFWPAL LEKAYAKVCGSYADMNLGTPSEAMMDFTGGIHITFKLTDAPPNLWDLLFRAAKSKSLIGC GTPQGETSANTVAPNGLVRGHAYTVTGVRQIMSQGMPVNLIRLFNPWGQGEWIGDWSDNS SLWQTVSPDDQKMCLSVEENGEFWMTMKHFCENFAEVDICCLCPDFLDGNPTCHWTPSFH DGRWVAGTTSGGCMNFPNSFWTNPQYRVKIGELGGDCSETQGDNNLLVSLMQKPDKRNRR LVKSLHIGFSVFEVPAQFKGQGGKFPAFFFNNNVPVAQSKNYVNAREVMEFFRLKPGEYL IVPSTFKPNETASFILSILSKVKAQIHENSNDQDMEEILFSPKTPKPTPTVDLEHKGGDV DSKITLFQKYSDEFEEVDAEQLQRTLNENLIQGNAKKTQGFSLESCQSMVALMDTSITGK LNVAEFLRLWRKVTMYKDIFFHTDVDRSGMLSLSELRNAIMASGIRVGDDMLNLMALRYG GCSGNISLESFISLVLRMDCMTKIFRQLNDGGAISLQENEWMYISMYT NT seq 2127 nt NT seq  +upstreamnt  +downstreamnt atgcctcctcccggtgtgtgcatgagtataatgcaggagcgccacaagaaagagggtgtt gggagccttgccaacccagagaaacacagcaaccaagacttccagcagctgaagcaatat tgtttggtcaggggggtaaggtatatcgatgagatgttccccccagaccacaactccatt ggtgatgggctagtttcacctgatgacatggccagggtggtgtggttgagaccagcgaaa atggtacggaatccagattttactgttgatggaatttcaaggtttgactttgggcaagga atagttggagattgctggtttcttgcttccattggggctttgacgttccagaagcacatc ctggagcaagtagtgcccctaaaccaaagctttaaagatgactactgcggaatattccac ttccggttctggaggtttgggaggtgggtggacgttgtgatcgatgacaagctaccaaca gttgacggcaggctcattttcgttcattcaaaaactcccaatgagttttggcccgccttg ctggagaaagcctacgccaaggtgtgtggctcctacgcagacatgaatttagggacccct tcagaggctatgatggacttcactggagggattcacatcacgttcaagctcactgacgct ccaccaaatctgtgggacctcctgttcagagctgccaagtcaaaatctctgattggatgt ggcacacctcaaggggaaacatcagcgaacacggtggcacccaacggattagtgagggga catgcctacaccgtcacaggagttagacagatcatgagccaaggcatgccagtgaatctg atccgcctcttcaacccctggggccagggagagtggattggagactggagcgataattcc tccctgtggcaaacagtgagtcctgacgatcagaagatgtgtctgtcagtggaagagaat ggggaattctggatgacaatgaaacatttctgtgagaatttcgcagaagtggatatctgc tgtctgtgccctgattttctcgatggcaaccccacttgtcattggaccccctcattccac gatggcagatgggttgcaggaaccacttctggtggttgcatgaatttcccaaacagtttc tggaccaatccccagtatcgggtgaagattggggaattgggcggggactgctctgagaca cagggggacaacaacttgttggtgtctctgatgcagaagcctgataaaagaaacagacgc ctggtcaaaagtctccacattggcttctccgtctttgaggtgcctgcccaattcaaaggc cagggggggaagtttcctgccttcttcttcaacaacaatgtgcctgtcgcccaatccaaa aactatgtgaatgctcgggaagtgatggagttcttcaggctgaaacctggtgaatacctg atcgtgccatcaaccttcaaaccaaatgaaaccgcctccttcatcctgtccatcctctcc aaggtgaaggcccaaatccatgaaaattccaatgaccaagatatggaggaaatcctgttt tccccaaaaaccccaaagcccacacctacagtagatctagaacacaagggaggagatgtg gacagcaaaataactctgtttcagaagtattctgatgagtttgaggaggtggatgctgaa cagcttcagaggactctgaatgaaaatctgatccaaggaaatgcaaagaaaacccaaggc ttcagcttggagtcctgtcaaagcatggtggccttgatggatacatcaatcactggaaaa ctgaacgttgctgaatttctacgtctatggagaaaagttaccatgtacaaggacatcttc ttccacacagatgtggaccgttctggaatgttgtcattgagtgaactgaggaacgcaatc atggcttcagggatcagggtgggggatgacatgctaaacctgatggctctgcgctacggt ggatgttctggaaacatcagcctggagagtttcatcagcctagtcctacgcatggactgc atgaccaaaatattcagacaactcaatgatggaggggccatatctcttcaagagaatgag tggatgtacatctccatgtatacataa

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