Coregonus clupeaformis (lake whitefish): 121544776
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Entry
121544776 CDS
T08357
Name
(RefSeq) bone morphogenetic protein 4-like
KO
K04662
bone morphogenetic protein 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121544776
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121544776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121544776
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121544776
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121544776
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Morphogens
121544776
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
121544776
NCBI-ProteinID:
XP_041710852
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Position
29:19033813..19051188
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AA seq
407 aa
AA seq
DB search
MIPGNRMLMVILLCQVLLGESNHASLIPEEGKKKAPGLQSRTAGQSHELLRDFEATLLHM
FGLQRRPRPSRLATVPRYLLDLYRLQSGEAEEAGAHDTTFEYPERSASRANTVRGFHHEE
HMEPVHPGEPQTKNGEAIPLRFLFNLSNIPEDELLSSAELRLFRQQIDEAITESEGDKDG
LHRINVYEVLKPPRAGQLITRLLDTRLVRHNASRWESFDVSPAVLRWTQERLPNHGLAVE
VQHLNKTPRHQGRHVRISRSLHQEPGEDWEQLRPLLVTFGHDGKGHPLTRRAKRSPKQRG
RKRNRNCRRHALYVDFSDVGWNDWIVAPPGYQAYYCHGECPFPLADHLNSTNHAIVQTLV
NSVNTNIPKACCVPTELSAISMLYLDEHDKVVLKNYQEMVVEGCGCR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgattcctggtaatcgaatgctgatggtcattttattatgccaagtcctgctgggagag
agcaaccatgctagtctgatacctgaggaagggaagaagaaagccccgggcctgcagagt
cggacggctggtcagagccatgaactgctgcgggactttgaggccacgctgctgcacatg
tttgggctgcagaggcgaccgcggcccagccgcttggccaccgtgccacgctatctgctg
gacctctaccggctgcagtcgggcgaggctgaggaggccggcgcccacgacaccaccttt
gagtaccccgagaggtcggctagccgcgccaacactgtgaggggcttccaccacgaagag
cacatggagccggttcatccgggcgagcctcagacgaagaacggagaggccatcccgctg
cgcttcctcttcaacctcagcaacatcccagaggacgagttgctctcatcggccgagctg
cgtctgttccggcagcagatcgacgaggccattacggaaagcgagggagacaaggatggg
ctccaccggataaatgtgtatgaggtgctgaagcccccgcgggccgggcagctaatcaca
cggcttttggacacgcggcttgtgcgccataacgcctcgcgctgggagagctttgacgtg
agccccgccgtgctgcgctggacacaggagcgcctgcccaaccacgggctggccgtggag
gtccagcacctcaacaagacaccgcgccaccagggccgccacgtgcgcatcagccgctcg
ctgcaccaggagcccggcgaggactgggagcagctacgccccctgctggtcaccttcggc
cacgatggcaagggccacccgttgacgcgccgggccaagcgcagcccaaagcagcggggg
cgtaagcgcaaccgcaactgccgccgtcacgctctttacgtggacttcagcgatgtaggc
tggaatgactggatagtggcacccccagggtaccaggcttactactgccatggggagtgc
cccttccccctggcggaccacctgaactctaccaaccacgcgattgtgcagacgttggtg
aactcggtgaacaccaacattcccaaggcctgctgtgtgcccacggagctcagtgccatc
tccatgctctatctggatgaacacgacaaggtggtcttaaaaaactaccaggaaatggta
gtggaagggtgcggctgccgctaa
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