Coregonus clupeaformis (lake whitefish): 121545114
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Entry
121545114 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121545114
04082 Neuroactive ligand signaling
121545114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121545114
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121545114
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
121545114
NCBI-ProteinID:
XP_041711448
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Position
29:45234836..45255987
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AA seq
486 aa
AA seq
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MCTMQVETVFVLFCICLMGVAGRSAHQRGHKLETYKQSRSRRQTSRMDGGTHSKSERPIL
KRSSDMTKSPMTKSEQLLRIDDHDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTMT
LYLRHYWKDERLSFPSTNNQSMTFDSRLAKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVH
PDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTDE
RISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHVFFFLLQTYFPATLMVMLSWV
SFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIE
YAAVNYLSTVQERKERKLRERLPCTCGIGNPDDMTCDPQISGYTTMDVNSTGNYGTAGNY
GMPENGGRQERMLAQVVLGDPQLTAQVKRPGYVNIWIDTHAIDKYSRVLFPGSYALFNII
YWSIYS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtgcactatgcaagtggagactgtgtttgtgctgttctgcatctgcctcatgggggtt
gctgggagatcagctcatcaaagaggtcacaagctggagacctacaaacaaagcagatcc
aggagacaaacgtcaagaatggatggaggaactcatagcaagtctgaaagaccaattcta
aaacgaagttcagacatgacaaaatctcccatgacaaaatctgagcagctcctaagaata
gatgaccatgactttaccatgagaccagcatttggaggaccccctattccagttggggta
gatgttcaggttgaaagtctggacacaatctctgaagtggatatggacttcaccatgacc
ctgtacctcaggcactactggaaggacgagcgcctgtctttccccagcaccaacaaccag
agcatgaccttcgacagcaggctggccaagaagatctgggttcctgatatgttctttgtc
cactccaagaggtccttcatccacgataccaccacagacaacgtcatgctgcgggtgcac
cctgacggaaacgtcctctacagtctgagagtcacagtaactgccatgtgcaacatggac
ctgagtcgcttccctctggacacacagacctgctccctggagatagagagctacgcgtac
acggacgatgacctcatgctgtactggaagaaaggcaacgagtcactgaacacggacgag
aggatatctttatcccagttcctcatccagaagttccacaccactacaaagctggccttt
tatagcagtacaggctggtacaaccgtctgtacatccacttcaccctacgacgccacgtc
ttcttcttcctgctccagacctacttccctgccaccctcatggtcatgctgtcctgggtc
tccttctggattgaccgcagggccgtccccgctagggtccctttgggtatcactacggtg
ctcaccatgtccaccatcatcactggagtcaacgcctccatgcccagagtgtcctacatc
aaagcagtagacatctacctgtgggtcagtttcgtatttgtcttcctctcagtcatagag
tatgcagcggtcaactacctctcgactgtgcaggagcggaaagagaggaaactaagagag
aggttgccctgtacctgtggcatcggcaacccggacgacatgacgtgcgacccccagatc
tctggctacaccaccatggacgtcaacagcacagggaactatggcaccgcagggaactat
gggatgccagagaacggcggcaggcaggagaggatgttagcccaggtagttctgggggat
ccccagctcacggcccaggtaaagaggccaggctacgtgaacatttggatagacacccac
gccatagacaagtactcacgggtcctcttccctggttcctacgccctgttcaacatcatc
tactggtccatctactcctaa
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