Coregonus clupeaformis (lake whitefish): 121545828
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Entry
121545828 CDS
T08357
Name
(RefSeq) homeobox protein Hox-B4a isoform X1
KO
K09303
homeobox protein HoxA/B/D3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121545828
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121545828
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121545828
NCBI-ProteinID:
XP_041712605
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Position
30:14771818..14850333
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AA seq
381 aa
AA seq
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MQKCIPSQLSGHTHSSIYQSEFDEVHPARSMDQHQSLLPCHLQDNTATEPAEYDTGHVEG
GHAPQFREIPLFQRSVTSSACISCTPYPTDPLWGTPDPVDTRHAKGKAVARGKRCSASTY
FLSPRHLFPWMRETRHAPNQSASDSNELGDSVCSRNEAGGLPSKGRDVGRDGDRDRGRDR
GRRERTAFTSTQLVELEKEFHFSPYLCRPRRLEMAAGLRLTDRQIKIWFQNRRMKYKKDH
KEDRGTETETPSPSCSTSPRSSVGVGYSGFRSACLVRGTRSPNLLFMNYDRTPALGSHSK
ANTSECLCVTPMDLPHLTTVTAPVSDSLQSALTVVDSSCLCTGLSKLTPGHLSSNVDNDI
SAYFRCRGCLLDLEPHTLTHL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagtgcataccttcccaactttcagggcatacccatagttctatttatcagagt
gaatttgatgaagtgcaccctgctaggtctatggaccagcaccagtcccttctcccatgt
catctacaggacaacactgcaaccgaacctgctgaatacgacaccggacacgttgaagga
ggccacgcgccacaattccgagagattccactcttccagcgttcagtcacctcttctgct
tgtatcagctgtacgccatacccgactgacccgttatggggcaccccggacccggtggat
acccgccatgccaagggcaaagcagtcgccagaggcaagaggtgcagtgcatccacctac
ttcctctcaccaaggcatctcttcccctggatgagagaaactcggcatgccccaaaccag
agtgcatctgactccaacgaattaggtgattcagtgtgcagtcgtaacgaggctggtggt
ctcccaagtaaaggaagagatgtagggcgagacggagacagagatagaggtagagacaga
gggagacgagagaggacggcattcaccagtactcagctagtggagctagaaaaggaattc
cacttcagcccctacctatgtcgaccccgcaggctggagatggctgcaggcctgaggctc
accgaccggcagatcaagatctggttccagaaccggcgcatgaaatacaagaaggatcat
aaggaggacagagggacagagactgagacaccatcaccatcctgctctaccagcccaagg
tcctctgttggagttgggtactcaggattcagaagtgcttgtctggtgagagggactaga
tctccaaaccttctcttcatgaattatgatcgtacccctgctttgggttctcacagcaag
gccaacaccagtgaatgtttatgtgtcactcccatggaccttccccatctcaccactgta
actgcacctgtctctgatagtctgcagtcagcccttacggttgtagacagcagttgtttg
tgcacaggtctctccaaactcaccccagggcacctatcctctaatgttgataatgacatc
agtgcatatttcagatgtaggggatgcctcttagacctagaacctcatacacttactcac
ctgtga
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