Coregonus clupeaformis (lake whitefish): 121545892
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Entry
121545892 CDS
T08357
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121545892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121545892
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121545892
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121545892
BRITE hierarchy
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
Prok-RING_4
zf-RING_4
zf-RING_10
zf-C3HC4_4
zf-RING_6
zf-RING_11
zf-rbx1
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
121545892
NCBI-ProteinID:
XP_041712722
LinkDB
All DBs
Position
30
AA seq
392 aa
AA seq
DB search
MGSQVSLDEMSVRAGQGSDEVLVSQAVWDYLAAAGRPWLIDFQDKQGLIAGIIRRGERGG
CCAVRLRPVEGSRSGGGPGMMEGGPISNETLKSFIDLCRCARKEMSKQETGPKWKRSVLP
CVGVGVLEGDGEGSLLPPQPPQPRRSQRQQQRYRKPAEDEACVVLSNSMNCMSHDASGQR
KQDNMEVKCSMMASSHSHSHSEADDHTSCSICMGDMVERTTLERCGHAFCRTCLDQAFKV
KRACPVCRLVYGQLIGNQPATGSMMVERDPDLELPGHEGYGCICIIYSFPPGLQAPEHPN
PGVSYPGTDRVAYLPDTPEGNRVLGLLRRAFEQRLIFTIGTSMTTGMHNVITWNDIHHKT
SIWGGPRCFGYPDPTYLVRVTEELREKGITAD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgcaagtttcattggatgaaatgagtgtgcgcgcggggcagggtagcgacgag
gtgcttgtgtcccaggcagtgtgggactacttggccgccgccggccggccctggctcata
gacttccaggacaagcagggcctcatcgccggcatcatccgcagaggggagcggggaggc
tgctgcgcagtgcggctacgccccgtagagggctcccgttctgggggaggacctgggatg
atggaggggggaccgatctccaatgagacccttaagtccttcatagacttatgccgctgc
gcccggaaagagatgagcaaacaggagactggtcctaagtggaagaggtctgtgctgccc
tgtgttggggtgggggtcctggagggggatggagaggggagcctgctaccacctcagcct
ccccagcccagacgctctcagaggcagcaacagaggtataggaagcctgcggaggatgag
gcctgtgtggtcctctccaactctatgaactgcatgtcccacgatgcatcaggacagagg
aagcaggacaacatggaagtcaagtgcagtatgatggcatcctctcatagccactcccac
agtgaagcagacgaccacacctcatgttccatctgcatgggcgacatggtggagaggacg
acactggagaggtgtggccacgcattctgccgtacatgtctggaccaggccttcaaggtg
aagagagcgtgtccggtgtgtcgtctggtgtacggccagctcataggcaatcagccggct
actgggagtatgatggtggagagggacccagatctcgagttgccgggacatgagggctac
gggtgtatctgcatcatctacagcttcccacctggtctacaggcgccggagcaccctaac
cctggtgtaagctacccgggtacggaccgcgtggcgtaccttccagacaccccagagggg
aaccgggtcctgggcctgctccgccgggccttcgagcagcgcctcatcttcactataggg
acctccatgaccacgggaatgcataatgtcattacctggaacgacatccaccacaagacc
tccatatggggcggaccacgctgctttggctacccagaccccacttacctggtgagagtg
actgaggaactccgagagaaaggcatcactgcagactga
DBGET
integrated database retrieval system