Coregonus clupeaformis (lake whitefish): 121546028
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Entry
121546028 CDS
T08357
Name
(RefSeq) troponin C, skeletal muscle isoform X1
KO
K12042
troponin C, skeletal muscle
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04814
Motor proteins
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121546028
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121546028
04820 Cytoskeleton in muscle cells
121546028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121546028
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
121546028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_5
AIF-1
EF-hand_9
EF-hand_FSTL1
EH
SPARC_Ca_bdg
Motif
Other DBs
NCBI-GeneID:
121546028
NCBI-ProteinID:
XP_041712942
LinkDB
All DBs
Position
30:complement(41152362..41156320)
Genome browser
AA seq
161 aa
AA seq
DB search
MPTETQSDARSFLSEDMIAEFQAAFNLFDSDGGGDISTRELGQVMRMLGQNPTREELALI
IEEVDEDGSGSIDFEEFLVMMVRLLKEDQAGKSEEELSEVFRIFDKNGDGFIDREELNDI
LAATGEPVTEEECTELMTDADLNKDNRLDFDEFLKMMENVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgaaacacagagcgacgcccgctccttcctgagcgaggatatgattgctgag
ttccaggctgccttcaacctgttcgacagtgacggtggtggtgacatcagcaccagggag
ttgggtcaggtgatgaggatgttgggccagaacccgaccagagaggagttggccctcatc
attgaggaggtcgatgaggatggtagcggcagtatcgacttcgaggagttcttggtcatg
atggtgaggctcctaaaggaggaccaggccggcaagtccgaggaagaattatcagaggtc
ttccgtatattcgacaaaaatggcgacggttttattgaccgtgaggagttaaatgacatc
ttggccgccactggagagccagtcacagaggaggaatgtaccgagctaatgacagacgca
gacctaaacaaagacaacaggcttgattttgatgaatttctgaaaatgatggagaatgta
cagtaa
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