Coregonus clupeaformis (lake whitefish): 121546246
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Entry
121546246 CDS
T08357
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121546246 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121546246 (lrit3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_1
Ig_2
ig
LRR_5
fn3
LRR_14
C2-set_3
V-set
C2-set_2
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
121546246
NCBI-ProteinID:
XP_041713322
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All DBs
Position
3:complement(19213715..19225732)
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AA seq
641 aa
AA seq
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MHLLLYAHVFLCCFSVAHSFCPSQCTCVYHGRSDGTGTRSVLCNDPDMSDIPVNVPVDTV
KLRVEKTAVRRIPTEAFYYLNDLRYLWITYNSISSVDAAAFYNLKVLHELRLDGNLISTF
PWESLKEMPSLRTLDLHNNQLTSVAVEAIPYLVNITYLDISSNKLTTLSSDLVDIWPPFN
RMHVSSNLSQKVVLGLQDNPWVCDCRISKLIELSKMSDTSVVLMDQFLSCSGPENLAGVM
FQRAELDQCLKPSVMMSATKITASLGSNVLLRCDATGYPTPTLIWTTSDGSPVNNTVVQE
SPGEGVRWSVISLNGISYKDDGEYSCKAKNFAGNAEAAISLSVAGYVATTMPPQRPNGEA
EGNSPSTTSSAPATGFPNSPSTLFTTTAPATTTLPPVPTKKKLTPSNVQQKAPPKPSKIQ
QGSDNMLAADQSKKKDASKSVQDLEIVEETVDSAVLLWTADGLPSDAPLTVVYSTYDDED
DSKRTMDTDAGSGKVLLEGLTSGMRYQVCLVTKGSAAGIDPCINFFTLDIVEDDAANQLL
MIVSGIACAMALPVIGLLVYKILSLYCQSSVPGLEDDLSKDTYVKFETLSMKQRTLNANP
SELWARRQTEESQERMLLFSRSSIDSQMTYRSDSSRSEFLC
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttcttctctacgcccatgtcttcctgtgctgcttcagtgtggcccattccttc
tgtccttcccagtgtacctgtgtttaccatggacggagtgatggaacggggaccagatct
gtgctgtgtaacgacccagacatgtccgacatccccgtcaacgtccccgtggatacggtc
aaactgcgggtagagaagacggcagtgcggcgcatccccaccgaggccttctactacctg
aacgacctgcgctacctgtggatcacctacaactctatctcgtctgtggacgctgccgcc
ttctacaacctcaaggtcctccacgaactgcggctggacgggaacctgatctccaccttt
ccctgggagtccctaaaggagatgcctagtctgaggacgctggatcttcacaacaaccaa
ttgaccagcgtggctgtggaggctatcccgtatctggtcaacatcacctacctggatatc
tccagcaacaagctgaccactctgtcttcggacctcgtggatatctggccgccgttcaac
agaatgcatgtctcttccaacctgtcccagaaagtggtgctcggtcttcaggacaacccg
tgggtctgcgactgcaggatctccaagctgatcgagctctccaaaatgtctgacacgtca
gtagtcctaatggatcagttcctgtcctgcagcgggcctgagaacctggctggggttatg
ttccaaagggcggagctggaccaatgtctcaagccatccgtcatgatgtcagccaccaag
attacagcctctttgggaagcaatgtgcttcttcgctgtgatgccacgggttaccccaca
cctaccctcatctggaccacttcagatggctcacctgtcaacaacacagttgtccaggag
tctccgggagaaggtgtccgatggtccgtcatcagcctaaatgggatctcatacaaagac
gacggggagtacagctgcaaggctaagaacttcgccggtaatgcagaggctgccatcagc
ctgtctgtggcaggttatgtcgctacaaccatgcccccacagaggcccaatggagaggct
gaagggaatagcccatccacaacgtcctctgctccggcaactggcttccccaactcccct
agcaccctgtttaccaccaccgccccagccacgaccacgctgccacctgtccccaccaag
aagaaactcacgcccagcaacgtgcagcagaaagccccacccaaaccatccaagatccag
caaggcagcgacaatatgctggcggctgatcagagcaaaaagaaagacgcttccaagtcc
gtccaagatctggagatcgtggaggaaacggtggacagcgctgttctactctggacggcc
gacggtttgccgagcgatgcccctctcaccgttgtgtactctacttacgacgatgaggac
gactccaaaaggacaatggataccgatgctgggagtggcaaggtcctcctcgaaggcttg
acttctggaatgaggtaccaggtttgtctggttaccaagggaagtgccgcagggatagac
ccctgcatcaacttcttcacactggacattgttgaggacgatgccgcgaaccagctgctg
atgatcgtcagcggcattgcctgcgccatggctttacctgtcatcggtctgctggtctac
aagatcctctcactctactgccagagtagtgtgccaggtttggaagacgatctgtctaaa
gacacgtatgtgaagttcgagacactgtcgatgaagcagagaaccttgaacgctaatccc
agtgaattgtgggcccgcaggcagaccgaggagtcccaagagaggatgctcctcttctcg
aggtccagcattgactcacaaatgacatacaggagtgacagttccaggtcagaatttttg
tgctag
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