Coregonus clupeaformis (lake whitefish): 121546362
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Entry
121546362 CDS
T08357
Symbol
nr2e3
Name
(RefSeq) photoreceptor-specific nuclear receptor
KO
K08546
nuclear receptor subfamily 2 group E member 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121546362 (nr2e3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121546362 (nr2e3)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
121546362 (nr2e3)
Nuclear receptors [BR:
cclu03310
]
2. Hepatocyte nuclear factor 4 like
2E. Tailless like receptor
121546362 (nr2e3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
121546362
NCBI-ProteinID:
XP_041713507
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All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MMEDHLSKIHPSSSSPSQSSGSSGTDCDSRGAKSPAPGKALSPALLCKVCGDTSSGKHYG
IYACNGCSGFFKRSVRRRLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQN
ERQPRSTSQVHLDSIDVDTDKEHLATTRDPTSSSSSSSSCSVITRPHITSTSTSSSSAPP
QRCGSSPSPQNNHRFMVSLMTAETCAKLEPEDVDENIDVTSNEPERASSDYHMSLYPSST
ENVYETSARLLFMSVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLCAIQWSLPLDSCPL
LSLPDVSPTTTQSKTSYSSLDLRLLQEVFSRFKALAVDPTEFACLKAIVLFKPETRGLKD
PEQVENLQDQSQVMLGQHIRSHYSSQPARFGKLLLLLPSLRFVSSERIELLFFHRTIGNT
PMEKLLCDMFKN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggatcacctgtctaagatccatccctcctcctcctctccaagccaatcttca
gggagcagtggcaccgactgtgacagcagaggagcaaagagtccagccccgggtaaagcc
ctgagtccagcgctgctctgtaaggtctgtggagacaccagcagtggaaaacactacggc
atctacgcctgcaacggctgcagcgggttcttcaaacgcagcgtccgacggagactcata
tacaggtgtcaggctggtacgggcatgtgcccagtggataaggcccatcggaaccagtgc
caagcctgtcggctgaagaagtgcctacaggcaggcatgaacaaagatgctgtccagaac
gagcgtcagccccgcagcacgtctcaggtgcatctggactccatcgacgtggacacagac
aaggagcacctggccaccacacgggatcccacttcctcttcctcctcttcctcctcctgc
tcagtgatcacccggccccacatcacctccacctccaccagctcctcctctgccccccca
cagcgctgtggctcctcccccagccctcagaacaaccaccgcttcatggtcagcctcatg
accgctgagacatgcgctaaactggagcctgaggatgttgatgagaacattgatgtgacc
agtaacgagccagagagggcgtcctcagactaccacatgtccctgtacccttccagtaca
gagaacgtgtacgagacttcagcccggcttctctttatgtctgttaaatgggccaagaac
cttccagtgttctccaatctccccttcagagaccaggtgatcctgctggaggaggcgtgg
tctgaactcttcctgctgtgtgccatccagtggtctctccccctggacagctgtcctctg
ctgtccctccctgacgtgtcccccaccaccacgcagagtaagacatcctacagcagcctg
gacctgcgtctgctccaggaggtcttcagtaggttcaaagccctggccgtagaccccact
gagttcgcctgcctcaaggccatcgttctctttaaaccagagacccgaggtctgaaggac
ccagagcaggtagagaacctacaggatcagtcccaggtgatgttgggacaacacattaga
tcacattactccagtcagcctgccagatttgggaagctcctcctgctgttgccctctctg
cgtttcgtcagctccgagcggatcgagctcctcttcttccacaggaccatcggcaacacc
cctatggagaaactgctgtgtgacatgttcaagaactaa
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