Coregonus clupeaformis (lake whitefish): 121549179
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Entry
121549179 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121549179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121549179
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121549179
BRITE hierarchy
Motif
Pfam:
ArfGap
BAR_3
PH
Ank_2
Ank
SH3_9
SH3_2
SH3_1
Ank_5
Ank_4
BAR
Ank_3
PH_9
YscO
Motif
Other DBs
NCBI-GeneID:
121549179
NCBI-ProteinID:
XP_045066198
LinkDB
All DBs
Position
33:complement(35692872..35750341)
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AA seq
1045 aa
AA seq
DB search
MPPPELITVTEFVAETKEDYKAPTTSNFTTRMSHCRNAVAALEEALDIDRGVLYKIKKSV
KAINNTGLAHFDNEEQYIQAIEKFGENCVCREDPEVGSAFLNFAVFTKELTALFKNLLQN
MNNIITFPLDSLLKGDLKGVKGDLKKPFDKAWKDYETKLTKIEKEKKEHAKQHGMIRTEF
SGGEIAEEMEKERRLFQLQMCEYLLKVNEIETKKGVNFLQNLIKYFHAQCNFFQDGLNAV
NSLRPSIEKLATDLITIKQTQDGERKQLSQLRDVLKSSLQSEQKEDSQAKQTGYSLHQLQ
GNKAYGTEYSGILYKRSEGLRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKLN
PDEKKSFDLFSHDRTYHFQAEEEAECQIWISVLQNSKEEALNDAFKGDQDRGENNIVQEL
TKAIVSEVKRMSGNDVCCDCEAPKPTWLSTNLGVLICIECSGIHREMGVHYSRIQSLTLD
VLGTADLLLAKNVGNVGFNEIMEADLSAQGVTKPNPSSDMQTRKDYITAKYTEKKFVQRK
CADAESRLHVLCLAVKTQNILSLIQVYAEGEDLMETIPLANEHEPGETALHLAVRMVDRN
SLHFVDFLAQNSGNLDRQTAKGSTALHYCCLTDNSECLKLLLRGRASVSIANEAGETPMD
IAKRLRHTQCEELLTQAVTGKFNVHVHVEYEWRLQNNDDDLDESEDEMEDKPIPHRRSEQ
ERPFSCFVPGNGPMGPVPGGLNMASLARNAASLAREKQRAHVPSMMMNNETYGTILDLSP
LPPGMPGVTGGLGVHIPPLPPRNASKGPGWKQAPMEVMGRQRSCSDPPNPHIPERNSSMN
VLPTAVPPAALPPPVSKRTSVMGPRGCKTAPLPPLPPVLPGPPVSPIFPLPLPPVPPTVP
PSPSFKPTQPPPVPAHHPRSRAAGPKSPKSPISSDKPTPKGPPGRPAGPTNRSAVKNAPV
TGSPQSSGPTPPTPKPRANHPKQRPKRVKAIYKCSADNPDELTFTEGEVIVVDGEEDQEW
WVGHIEGESTRSGVFPATFVCFITD
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccggagttgatcacggtcacggaatttgtggccgaaactaaggaggactac
aaagcgcccacaacctcaaacttcaccactcggatgtcgcattgtcggaacgccgtggca
gcattggaagaggctctagacatagaccgaggagtactttacaagatcaagaagtctgtc
aaggccataaacaacactggcctggcccactttgacaatgaagaacagtacatccaggct
atagagaagttcggggaaaactgtgtctgcagagaggaccctgaggtgggctcagccttc
ctcaattttgccgtctttaccaaagagctcacagccctcttcaagaacctgttgcagaac
atgaacaacatcatcaccttccccttagacagtctactgaaaggagacctgaaaggggtc
aaaggggatctgaaaaagccttttgataaagcctggaaggattacgaaactaaactcact
aagatagagaaggagaagaaggagcatgctaagcagcatgggatgatacggacagagttc
agtggaggagagatcgctgaggagatggagaaggagagacgcctcttccagctccagatg
tgcgagtatcttctaaaagtgaatgaaatcgaaacgaaaaagggggtcaactttctccag
aacctcatcaaatatttccacgcccagtgcaacttcttccaggatgggctaaacgcagtg
aatagcctcagaccttccatagagaagctggcgacagacttgattacaatcaaacagacc
caagatggagagaggaaacagctgagtcagctcagagatgttctcaagtcctccctacaa
tctgaacagaaagaggactcccaggccaaacagacaggatacagccttcatcagctccaa
gggaataaggcctacggcacggaatacagtggaattctgtataagaggagtgagggcctg
aggaaagtgtggcagaagaggaagtgttctgtgaagaacgggttcctgaccatctcccat
ggaacggcgaacagaccaccagctaaactcaacctgctaacctgtcaagtgaagctcaac
ccagatgagaagaaaagctttgatctcttctcccatgacagaacctatcactttcaagct
gaggaagaggctgagtgtcagatatggatctcagtcctgcagaacagtaaggaggaggcc
ctaaacgatgccttcaaaggagaccaggacagaggggagaacaacatagtgcaggagctg
accaaggccatcgtcagcgaggtcaagaggatgagcggcaacgacgtctgctgcgactgt
gaagcgcccaagcccacctggctctccactaacctgggagtgctcatctgcatcgagtgt
tctggaatccacagggagatgggcgtccactattctagaatacagtctctcacactggac
gtcctgggaaccgcagacctcctgctggctaagaatgtgggcaatgtaggtttcaatgag
atcatggaagcggacctgtctgcacagggcgtgaccaaacccaacccctcaagtgacatg
cagacgcggaaggactacatcacagccaagtacacagagaagaagtttgttcagaggaag
tgtgcggacgcggagtccaggctgcacgtcctttgtttagcagtgaagacccaaaacatt
ctctccctcatccaggtttacgctgaaggagaggacctgatggagaccataccgctggcc
aatgagcatgaaccgggtgagacagcactacatctagcagtacgaatggtggaccgcaac
tccctccattttgtggacttcctggcccagaacagtgggaacctggataggcagacagcc
aaagggagcacggcgctgcactactgctgcctgacagacaacagcgagtgtctgaaactg
ctgctgcggggcagggcctcggtcagtattgccaacgaggcaggagaaacaccaatggac
atcgccaagcgcctcagacatacgcagtgtgaggagctgctgacccaggctgtgacgggg
aagtttaacgtccatgtgcacgtggaatatgagtggcggctccaaaacaacgatgacgac
ctggacgagagcgaagatgagatggaggacaagcccatccctcacagacggtcagagcag
gagcgtccgttcagctgttttgtcccaggcaatggtcccatgggtcccgtgcctggtggt
ctcaacatggcctccctggcccgcaatgcagccagcctggccagggaaaagcagcgagcc
catgtccccagcatgatgatgaacaatgagacctacggcaccatcctggacctcagcccc
cttccccccggcatgccaggggtaacagggggactgggggtacacatcccacccctgccc
cccaggaacgccagcaaaggcccagggtggaagcaggctcctatggaggtgatgggtaga
cagaggtcctgctcagaccccccaaaccctcacatcccggagcgtaacagctccatgaat
gtgcttcccacagctgttccacctgctgctctgcctcccccggtgagtaaaaggaccagt
gtgatggggcctagaggctgtaagactgctcctctaccaccactacctccagtattacct
gggcctccagtgtcccccatcttcccactgccactaccaccagtcccgccaacagtgccc
ccttcaccctccttcaaacccacacagccccctcctgtacccgcccaccatcccagaagc
agagccgcagggcccaaatcacctaaatcccccattagttcagataaacccacacctaaa
ggaccacccggcaggcctgctggacccactaatagatccgcagtaaagaatgcacctgta
actggatcccctcagagctctggtccaactcctccaacacccaagccccgtgctaaccat
cctaaacagaggcccaagagggtgaaagccatctacaaatgttcagctgataacccagat
gagctgacgttcactgagggagaggtgatcgtagtggatggagaggaagaccaggagtgg
tgggtaggacatatcgagggggagtcgaccaggagtggagtcttccctgcgacattcgtg
tgcttcatcactgactga
DBGET
integrated database retrieval system
