Coregonus clupeaformis (lake whitefish): 121549817
Help
Entry
121549817 CDS
T08357
Name
(RefSeq) protein O-mannosyl-transferase TMTC2
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121549817
Glycosyltransferases [BR:
cclu01003
]
O-Glycan biosynthesis
O-linked Man type
121549817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TMTC_DUF1736
TPR_1
TPR_16
TPR_12
TPR_11
TPR_17
TPR_19
TPR_14
TPR_10
TPR_7
TPR_CcmH_CycH
TPR_Slam
TPR_4
NatA_aux_su
TPR_MalT
TPR_15
FAT
HAT_Syf1_CNRKL1_C
ANAPC3
HAT_PRP39_C
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
121549817
NCBI-ProteinID:
XP_041717659
LinkDB
All DBs
Position
2:complement(2795120..2891560)
Genome browser
AA seq
879 aa
AA seq
DB search
MITELVCSAVALVLYLNTLNADFCYDDSRAIKTNQDLLPETPWTNVLYDDFWGTLLTHSG
SHKSFRPLCTLSFRLNHALGGLRPWGYHLVNMGLHGAVTGLFTALCRPLLGGGPWSLLAG
LLFASHPVHTEAVAGVVGRADVGAALLFLLSLLCYTRHCGLRSAYTASSRDCQTRGCGRL
RARTWLWLLGSLVCAASSMLWKEQGVTVLAVSAAYDLFVFQRLRFRQAVVVLLGKKRNTT
ILLSLSVLVSWGVLLLAARLYWMGNKPPNFSNSDNPAADSPHLLTRTLTFLYLPAANAWL
LLCPDQLSFDWSMDALPLIKTFVDWRNLHTVAFYAGLSLLAWFGLRSSSSPASKAKETNG
KAHLANGKALTNGHSYHPPDGNHNNHKINSEQGSPKTNGKTTLNGNGFTKPYHCSPRTTH
PSLPSFATLPSTENVVVFSLGLLSLPFLPATNLFFYVGFVVAERLLYIPSMGFCLLVAVG
ARALYVRLRTRGPRVVLLGLFAGLVLLYGIKTLLRNRDWSNEEMLYKSGISVNPAKAWGN
LGNVLKNQGKMAEAERAYRNALYYRGNMADMLYNLGLLLQENHRSSEAMHYYKLAIGSRP
TLASAYLNTGIILMNQGGLEEAKRTFVTCAEIPDENLKDPHTHKSSVTSCLYNLGKLLHE
QGLQEEALSVYKEAVQKMPRQFAPQSLYNMMGEAYMRLNRLEEAGHWYRESLRAKPDHIP
AHLTYGKLLSIIGQKTEAENYYQRAIQLDPSKGNCYMHYGQFLLEQSRLAEAAEMAERAA
DLDSSEFDVVFSAAHMLRQASLNQAAERHYERAANLRPDYPAALMNLGAILHLNGRLPEA
ETNYLRALQLKPDDVITQSNLRKLWNIMERQGLRTTQGP
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgattacagagttggtgtgtagcgccgtggcattggtcctctatctcaacacactgaac
gcggatttctgctacgatgacagccgtgcgatcaagaccaaccaggaccttctccctgag
accccgtggaccaacgtcctgtatgatgacttctggggcaccctgctcacccacagcggc
agccacaagtccttccggcccctctgcactctctccttccgcctcaaccacgccctgggc
ggcctgcgcccctggggctaccacctggtcaacatgggcctccacggggctgtcacaggc
ctcttcactgccctctgtcgtcccctcctggggggaggtccgtggagtcttctggcgggg
ctcctcttcgcctcccacccggtgcatacggaagctgtggcgggggtggtggggagggcc
gacgtcggcgcggcactgctgttcctcttgtctcttctctgttacacaaggcactgcggg
ctccgctcggcctacacggcctcttccagggactgtcagaccaggggctgtggtaggctt
cgagccaggacgtggctgtggctgctcggcagcctggtctgcgcagcgtccagcatgctg
tggaaggagcagggagtcacggtgttggccgtgtcagcggcttacgacctctttgtgttc
cagcggctccggttccgccaggcggtggtcgtcctcctggggaagaagaggaacaccact
atactgctgagtctgagtgtgttggtctcctggggcgtgcttctcctggctgctcgtctc
tactggatgggtaacaagccccccaacttctccaactccgacaacccggcggccgactct
ccgcacctcctcacgcgaactctgaccttcctctacctgcccgccgccaatgcctggctc
ctcctatgccctgaccagctcagcttcgattggtccatggatgctctaccgctaatcaag
acctttgttgattggaggaaccttcacaccgtggccttctatgctggattatctctcctg
gcttggtttggcctccgtagcagtagcagccctgcctccaaggccaaggagaccaatggg
aaagctcacttggcgaacgggaaggccctcaccaacgggcacagctaccatcctccagat
ggcaaccacaacaaccacaagataaactcagagcagggctctccaaagaccaatgggaaa
accaccctcaacgggaatgggttcaccaaaccctaccactgttcccctcggaccacccac
ccctccctcccctcatttgccaccctcccctccacggaaaacgtggtggtcttctccctg
ggcctactctcgctgcccttcctcccggccacaaacctgttcttctacgtgggcttcgtg
gtggccgagcggctgctgtacatacccagcatgggcttctgtctgctggtggcggtgggg
gcccgagcgctgtacgttaggctgaggaccaggggccccagggtcgtgctactgggtctg
ttcgcgggcctggtgctgctgtacggcatcaagacgctgctgaggaacagggactggagc
aacgaggagatgctctacaagtcagggatcagtgttaaccccgctaaagcatggggcaac
ctgggaaacgtcctgaagaaccagggcaagatggccgaggcagagagggcgtaccggaat
gccctgtactaccggggaaacatggctgacatgctgtataatctgggtttgctgctacaa
gagaaccacaggtcctcagaggcaatgcattactataagctggccattgggagcaggcca
actctggcgtcggcctacttgaacacgggcatcatcctgatgaaccagggcggtctggag
gaggccaagaggacctttgtaacctgcgctgagatcccagacgagaacctgaaggacccc
cacacccacaagagctccgtcaccagctgcctgtacaacctgggcaagctgctccacgag
cagggcctgcaggaggaggctctgtctgtctataaagaagcggtgcagaagatgcctagg
cagtttgcacctcagagtctctacaacatgatgggagaggcctacatgaggctgaatagg
ctggaggaggcggggcactggtacagggagtcgctgagggccaagccggatcacatcccc
gcccacttgacctacgggaaactcctgtccatcattgggcagaagactgaggcagagaat
tactatcaaagggccattcagctggacccttccaaaggaaactgctacatgcattatggc
cagtttctgctggagcagtctcgtctggcggaggcagcagagatggcagagagagctgca
gatctggacagctcagagtttgacgtggtcttcagcgccgctcacatgctcagacaggcc
agtctaaaccaggcagcagagcggcattatgagcgagcggcaaacctcagaccagactat
ccggcggccttgatgaacctgggcgccatcctccacctgaatgggcggctgcctgaggcg
gagaccaactacctgcgggcactgcagctcaagcctgacgatgtcatcacccagtccaac
ctgcgcaagctgtggaacatcatggagaggcagggcctgaggaccacacaggggccttga
DBGET
integrated database retrieval system
