Coregonus clupeaformis (lake whitefish): 121550036
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Entry
121550036 CDS
T08357
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121550036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121550036
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121550036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
Ank
PH
BAR
SH3_9
SH3_1
Ank_4
SH3_2
Ank_3
Ank_5
Ferritin_2
DUF4404
Motif
Other DBs
NCBI-GeneID:
121550036
NCBI-ProteinID:
XP_045066496
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All DBs
Position
34:complement(33515681..33591075)
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AA seq
1175 aa
AA seq
DB search
MCIDFGHKVTVVMRSSSSRLSSLSSKDSLWNPSRMPDQISVSEFLSETTEDYKSPTTSSF
TTRLQSCRNTVNVLEEALDQDRTALQKVKKSVKAIYSSGQDHVQNEENYAQALDKFGSNF
ISRDNPDLGTAFVKFSTLTKELSTLLKNLLQSLSHNVIFTLDSLLKGDLKGVKGDIKKPF
DKAWKDYEAKFTKIEKEKREHAKQHGMIRTEITGAEIAEEMEKERRLFQLQMCEYLIKVN
EIKTKKGVDLLQNLIKYYHAQCNFFQDGLKTADKLKQYIEKLAADLYNIKQTQDEEKKHL
TALRDLIKSSLQLDQKESRRDSQSKQGGYSMHQLQGNKEFGCEKKGYLMKKSDGLRKVWQ
RRKCSVKGGMLTISHATSNRQPVKLNLLTCQVKPCAEDRKCFDLISHNRTYHFQAEDEQE
FVIWISVLSNSKEEALNMAFRGGEDGGGGGGGGEDGLEDLTKAIIEDVLRIPGNEVCCDC
DAADPKWLSTNLGILTCIECSGIHREMGVHISRIQSMELDKLGTSELLLAKNVGNSSFNE
IMEGNLPCPSPKPTPSSDMTVRKEFINAKYVDHKFARKTCASSAAKTIELCEAVKSRDLL
SLIQVYAEGVELMEPLPEGGQEAGETALHYSVRTADQTSLHLVDFLVQNSGNLDKQTEWG
NTALHYCCMYEKHECLKLLLRGKPATDITNQNGETALDVARRLKNSQCEEALLQAAAGKF
YPHIHVEYAWSLRLEEMDESDDDLDDKPSPIKKDRSPRPQSFCHSSSMSPHDKLSLPGFI
SHRDKQQRMSYSAFTNQMYSVSTDLTSSSSPVADAPPLPPRNQGKAPHLAFLGSHSHYAT
LAGTRPYITPPSTLTPGGSSTLSKKRPPPPPPGHKRTLSDPPSPLSHSRGGISGGSDSTP
PTANKMSPLSNKFEGISQQQSTTSSNTKSTLGPRVLPKLPQKVALRKIDTIHPSMDKPGL
PPEVLQKSPPGPECLTKAIIPDKSQLGVLPPKPQPSELPPKHGELPPKPQLSDLPPKPQL
GDLPPKPQLKDLPPKPQLSQDGHPKPGAADLPIPRPPPGEPAPKPQSPDSPVANQQAETE
SPSPQGSEDTNGSPACAPETPVPLPRKINTGKTKSRRVKTIYDCQADNDDELTFVEGEVI
IVTGEEDGEWWIGHIEGQTERKGAFPMSFVHILSD
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatcgatttcggtcataaggtgacagtcgtcatgagatcttcctcttcccgtctg
tcaagtttatcttctaaagattctttatggaatccgagtaggatgccggatcaaatatcg
gtgtccgagtttctctcggagacaacagaggattacaaatctcctaccacgtccagcttc
acgacccgcctgcagagctgtaggaacacagtcaacgttctggaagaggctttggatcag
gacaggactgcgctgcagaaggtgaagaaatcagtcaaggccatctacagctcaggccaa
gaccatgtccagaatgaggagaactatgcccaggctctggataagtttggcagcaatttc
atcagcagagacaaccctgacctgggaacagccttcgtcaagttctccaccctgaccaag
gagctgtcgaccctgctcaagaacctgctccagagcctgagccataatgtgatcttcacc
ctggactcgctgctgaagggggacctgaaaggtgtgaaaggggacataaagaaaccattt
gacaaagcctggaaggactatgaagctaagtttacaaagatcgagaaagagaagagggaa
catgccaagcagcacgggatgattcgcacagagataacaggcgctgagatcgctgaggag
atggagaaggaacgccgtctcttccaactccagatgtgtgagtacctgatcaaagtcaac
gagatcaagaccaagaagggagtggaccttctccagaacctcatcaagtattaccatgca
caatgcaatttcttccaagatggcttgaagacagcagataagctgaagcagtacattgag
aagctggctgctgacctctacaatataaagcagacccaggatgaggagaagaaacatctg
actgctctcagagacctgatcaagtcctcccttcagctggaccagaaggagtctagaaga
gactcccagagtaagcagggtggctacagcatgcaccagctgcagggcaacaaggagttt
ggctgtgagaagaaaggctacctgatgaagaagagtgatgggctgaggaaggtgtggcag
aggaggaagtgttcagtgaagggtggcatgctcaccatctctcatgctacgtccaacagg
cagcctgtgaaactcaacctgctcacctgccaggtcaagccctgcgctgaggacaggaag
tgcttcgatctaatttcccataaccggacatatcacttccaggctgaggatgaacaggag
tttgtcatctggatctcggtgctatccaacagtaaggaggaggctctgaacatggcgttc
cgtggaggagaggacggaggaggaggaggaggaggaggagaggacggcctcgaggacctg
accaaagccatcatagaggacgtgctgcgcatccctggcaacgaagtctgctgtgactgt
gacgctgcagatccaaaatggctgtccactaacctaggcatcctgacctgcatcgagtgc
tctggtatccaccgggagatgggagtgcacatctcacgcatccaatccatggaactagat
aagctaggcacctctgaactcttgctggccaagaatgtagggaacagtagtttcaatgaa
ataatggaggggaaccttccttgtccctcaccaaagcccactccttctagtgatatgaca
gtgaggaaggagttcatcaatgctaagtatgtggaccacaagtttgcacggaagacctgt
gcctcctcggcagctaagaccattgagctgtgtgaggcggtcaagtccagggacctgctg
tctctcatccaggtgtacgctgagggggtggagctaatggagcctctgcccgagggtgga
caggaggccggagagactgcgctccactactctgtgcgcaccgctgaccagacctcactg
cacctggtggacttcctcgtgcagaacagtgggaacctggataagcagaccgagtgggga
aacacagccctgcactactgctgcatgtacgagaaacatgaatgcctcaaactactgctg
aggggcaaaccagccactgacatcaccaatcagaatggtgagacggcactggatgttgcc
aggcgactgaagaatagtcagtgtgaggaggcactgttgcaggctgcagcgggaaagttt
taccctcacatccacgtggagtatgcgtggagcctgaggcttgaggagatggacgagagc
gatgacgatctggatgacaagcctagtcccatcaagaaggaccgctccccgcggccccag
agtttctgccactcgtccagcatgtctccccatgacaagctgtctctgccgggcttcatc
agccaccgggacaagcagcagcgcatgtcttacagcgcattcaccaaccagatgtactca
gtctccaccgacctcacttcctcttcctcccccgtggccgacgccccccccctgcccccc
aggaaccagggcaaagcgccgcatttggcattcctcggctctcactcgcactacgccact
ctggccggcactcgaccatacatcactcctccctccaccctcacccctggaggcagctcc
accctgtccaagaagaggcctccgccccctccccctgggcacaaacgcaccctgtctgac
ccacccagcccgctctcccacagtagagggggtatatccgggggaagtgactccacccct
cctactgcgaacaagatgtcacctttatccaacaagtttgagggaatttcacagcagcaa
agtactacttctagcaacacaaagtctacacttggtccaagggttctacccaaactacct
cagaaagtggcactgcgtaagatcgacaccatacacccgtctatggacaaacccggcctg
cctcctgaggtgctccagaaatcccctccaggacctgaatgcctaacaaaagccatcata
cccgacaagtcccaactaggggtccttccccccaaaccccagccctctgaactgccccct
aaacatggagaactgccccccaagccccagctctccgacctccctcccaaaccccagtta
ggggacctaccgcccaaaccccagctcaaagacctaccccccaagcctcagctctcccaa
gacggccatccgaaaccaggggcagcagatctgcccattccgagaccacccccaggagag
cctgcgccgaagccccagtcccccgactcaccggtggccaatcaacaggcagagacggag
agcccgtctccccagggcagcgaggacaccaatgggagcccggcgtgtgctccagagaca
ccagtgcccttgccccggaagatcaacacggggaagaccaaatctcggcgggtgaagact
atctatgattgccaggctgacaacgatgacgagctgacgtttgtggagggagaggtgatc
atagtgacaggagaggaggacggggagtggtggatcggccacattgaagggcagacggag
aggaaaggggcgttcccaatgtcctttgtccacatcctaagtgactga
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