Coregonus clupeaformis (lake whitefish): 121551044
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Entry
121551044 CDS
T08357
Name
(RefSeq) sphingosine kinase 1-like
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00600
Sphingolipid metabolism
cclu01100
Metabolic pathways
cclu04020
Calcium signaling pathway
cclu04148
Efferocytosis
cclu04370
VEGF signaling pathway
cclu04371
Apelin signaling pathway
Module
cclu_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121551044
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
121551044
04371 Apelin signaling pathway
121551044
04020 Calcium signaling pathway
121551044
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121551044
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
121551044
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Gene cluster
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Motif
Pfam:
DAGK_cat
YegS_C
UPF0060
Tim54
Motif
Other DBs
NCBI-GeneID:
121551044
NCBI-ProteinID:
XP_041719503
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MDKDSAEPDPTRQRNGVVEGLYGEFTDSLNAKVRYSVSLTESSLAIQNISSSPGQDKLVF
NLTDCLGCRAYKVENEADVGAFFTAYFYPFKRRWMSTGMARQKVEQCFRVALVQDPLTNL
QEAERWARAIREASIRQIPRRHGVVYSEVRRPCRVMVLVNPQSGRGQALQLFSGHIEPML
TEASVPYTLVITEHQNHARDLVRETDLSQWDALVILSGDGLLFEVLNGLLEREDWEEAIQ
TPLGILPGGSGNALAASVHHYTESSPAWGEELLLSCGFLLCKGLVSRLDLVSVHLASSQR
IFSFLSLAWGFVADIDIESEKYRLVGAMRFLVGTLVRLASLRVYQGRLAYLPVKEALQPG
QGTKAHAPPSTPQHSSLCSSLPCGPNSSPNQNSRHNHSTNSNHNTAHNSSNNAITTMRTE
PQPANQKGPPDSLLADLEQPVPEHWTVVNEEDFVLVLAMFQSHLAEDMFAAPGAAADDGF
IHLLYVRAGISRLALLRLFMAMEKGAHLAIDCPHLVYERVKAFRLEPLSPEGAITVDGEM
VEYGPVQAQVHEGIARLISG
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggataaagacagcgccgaaccggacccaactcgtcagcgcaacggtgtcgtggaaggg
ctttatggagaattcacggactcgctcaacgcaaaggtcagatattctgtgagtttgacg
gagagttctctcgctattcaaaatatatcatcgtcacctggacaggataagttggttttc
aacttaactgactgtcttggctgccgggcttataaagtggagaacgaagcagacgttggg
gcgttctttacagcctatttctacccgttcaagagacgatggatgagcacaggcatggcc
cggcagaaagtagagcagtgctttcgggtcgcactggtccaggaccctctcactaatctt
caagaggcagagagatgggcgcgtgccatcagagaggcttctatccgccagataccccga
cgacatggtgtggtgtactctgaggtacggcggccctgcagggtcatggtgctggtgaac
ccccagagtgggcggggccaggcgctccagcttttctccgggcacatcgagcccatgctc
accgaggcttcagtcccctacacattggtcatcactgagcaccagaaccatgcgagggac
ctggtgagagagactgatctgtcacagtgggacgctctggtcatcctgtcaggagacggg
ctgctgttcgaggtgttgaatggtcttctggagagagaggactgggaggaggccatccag
acaccactgggcatcttaccagggggctcgggaaacgccctggcagcctccgtccaccac
tacactgagtcttccccggcctggggtgaggagctgctgctgagctgtggcttcctgctg
tgtaaaggcctggtgtctcggctggacctggtctctgtccacctggcctccagccaacgc
atcttctccttcctctccctggcctggggcttcgtggccgacatcgacatcgagagcgag
aaataccgcctcgtgggcgcaatgcgcttcctggtgggtacgctggtgcgcctggcctcc
ctcagggtgtatcagggtaggctggcatacctgcctgtcaaggaggccctgcagccaggc
cagggcaccaaggcccatgcccctccctccacaccccagcactcctccctctgctcatct
ctaccctgtgggcccaacagctcccccaatcagaactctcgccacaaccacagcacaaac
tccaaccacaacaccgcccacaactcctccaacaatgccatcaccaccatgaggacggag
ccccaaccagccaaccagaaggggcctcctgactcgctcctagcagacctggagcagcct
gtgcctgagcattggacagtagtgaatgaggaagactttgtactggtattggcaatgttc
cagtcccacttggctgaggacatgtttgccgcccctggggccgcagcagacgacggcttc
atccacctgttgtatgtgcgtgcaggcatctcccggctagccctgctcagactcttcatg
gccatggagaagggggcccacctggccattgactgcccacaccttgtgtacgagagggtg
aaggcctttcgcctggagcctctctcccccgagggagcgatcactgtggacggggagatg
gtggagtacgggccagtacaggcccaggttcatgaaggaatcgccaggctcatctcaggc
tga
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