Coregonus clupeaformis (lake whitefish): 121552280
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Entry
121552280 CDS
T08357
Name
(RefSeq) SAM and SH3 domain-containing protein 1-like isoform X1
KO
K23705
SAM and SH3 domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121552280
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
121552280
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPIDER
SAM_1
SAM_2
SH3_2
SHOCT-like_DUF2089-C
SH3_1
Motif
Other DBs
NCBI-GeneID:
121552280
NCBI-ProteinID:
XP_045067159
LinkDB
All DBs
Position
36:2761428..3085204
Genome browser
AA seq
1566 aa
AA seq
DB search
MTSTGPVIVFEWLKTLQLSQYVESFVDNGYDDLEVCKQIGDPDLDAIGVYIPHHRQRIHD
AVQRLKDEDKETAAGLYFTLEPMPPASEMYASHLVDQYESKLRSSKSWTEPNSDRVGRNG
GAYLGAQRNLTLGKRRELVIYPKLKLKIMIRDKLIKDGVNLARPPYSNKDGSLGNIDDLA
QEYSEYCNTSFSDVSDRMEELRKRRVSQDLDMENVDTSSTSLQLRSEIQESLGFSSEVST
PETERKMSLHKSSSEDGAKWDNKKKNKSFWQNFRKTSQKGVMRQMSKGEDIGYVASEITM
SDEERIQLMMMVKEKMITVEEALARLKEYESHSRQSSSTDTAEWTDGSSPNLNQSSNCNS
REQSDDEQSEDSLKFKRLHKLVNSTRRVRKKLIKVEEGKKAVSEDSLRLEVSSTCEDNTA
LYTGVLKKSSLPQDASLSSLTQDQLSLDGDTDSLTTSPSSSSLDTTWSGHKLVKTFSKSS
STHGLIRPPRRVPAGSGGLGTVGVGGSGSSFSELDGCGAEDEEKVSCSMTEGEMRKALTS
LSHGVSNNTLYGFYGLTRPRPNPHPQPHLLVALDDVSQSSPKPARHHANWLRKPDPNYAY
STKHLLYQRSRNYAKPPGVPSSCPSPLAPARCDLAKAKGGTLGGGGGGGWAFPPRRLRGR
TAVSELNITYVVERSLYGHLNWAQLVRPVTLSRAERRCLLEEDREADRKWAASVDRCTKR
VLLRIQQKSRTCSFGGFDLSNRSLHVVSAGSEPNSKNPEAVYREVVKSPTTSRISLGKKV
KSVKETMRKRMSKKYSSSLSEQSSPDGAPSSPQSPQPDTDSLEKPKLKAGGSVESLRSSL
SGQSSMSGQTVSTTDSSASNRESVKSEDGDDEEPPYRGPFCGRARVHTDFTPSPYDSDSL
KLKRGDVIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLSEEEEKPKRPVRRRRKGRPPKP
TSVEELLERINLKEHMPTFLFNGYEDLDTFKLLEEEDLDELNIRDPQHRAVLLTAVELLQ
EYDSSSDPERSGLSGSQEKLLSEGHSLVGDSPRDSGCYESNENLDNGKSRKTSRSIHSSA
GLQSPDYPTLPMTQSTEALQQSKMERTVNFTKHFFLKPTLRGFSMLGLRKGPRQTPMPAS
LSCEDLDGPPEATGPQAWKRSHSLGDLHWEQAFDQKKDHSLEAKPANGGSKLGTSSPVKG
LQAHGDGGSPPAQNWGSAVSPKWHSDLPHVPSQLPLRPPCPITLLPQPRESLPNPISSPP
EPQLGERSIRTHPKKPPVPPPVPIKKSKERLANGMRHPSLVLSSPTHSYTSTPTNSHPPS
PVISNPSPRAPALPSKASSTPASPSPASPTPASPASTATASPEPEEPGTPPAVPPPWLSD
LPESACPQAQIQGGGGKMTVARKVSHVKMAVDLHNVLEQRLEAEGIDLTEEPYSDKHGRC
GIPQPLVQRYSEDLEQPVKDVARAIDQVRVKQLRKQHRMAIPFGGLTEMCRKPLSPGHVS
TVSDWLVSIGLPMYATPLEKAGYDTLGHVSSLTESGVWEAGVRDERHARRLVSEARLVSA
PRDAQS
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaccggacctgttatcgtgtttgagtggctgaagaccctccagctctctcag
tatgtggagtccttcgtggataacggctacgatgatctggaagtttgcaaacaaattggg
gaccccgacctggatgctatcggtgtctacataccgcaccaccggcaacggatccacgac
gcggtgcaaaggctgaaagacgaggataaggaaacggcggcggggctgtattttacgctt
gagccgatgccccccgcgtccgaaatgtatgccagccatctggtggaccagtacgagtcc
aaactgcggtcttccaagtcttggaccgaaccgaacagtgaccgggtggggagaaatggg
ggcgcgtatctgggcgcacagaggaacctgacgcttggcaagcggagggagttggtgatt
taccccaaactgaagctgaagatcatgattagagataaactaatcaaagatggagtcaac
ctcgccaggccgccgtactcaaacaaggatggttctctggggaacattgatgacctggcc
caggagtactcagagtactgcaacacctccttcagtgacgtcagcgaccgcatggaggag
ctacgcaagagacgtgtgtcccaggatctcgacatggagaatgttgacacaagctccacc
tccctgcagcttcgctcagagatccaagagtcccttggcttcagcagtgaagtgtccacc
ccagagacagagagaaagatgtctctgcacaagtccagctctgaagatggagctaaatgg
gacaataagaagaagaacaaatccttctggcagaattttcgcaagacgtcgcagaaggga
gtcatgcggcagatgtcgaaaggagaggacataggctatgtggccagtgagatcaccatg
agtgacgaagagcgcatccagctgatgatgatggtgaaggagaagatgatcactgttgaa
gaggctttagctcggctgaaggagtatgagagccacagcagacagtccagcagtactgac
actgcagagtggactgacggatccagtcccaatcttaaccagtcctctaactgcaactct
cgggagcagtctgatgatgagcagtcggaggactctttgaagttcaaacggctccacaag
ctggtcaactctacccgccgagtcaggaagaaactcatcaaggtggaagaggggaagaaa
gccgtctccgaagattctttgagactggaggtgtcttctacctgtgaggacaacacagcc
ctgtacacaggggtcctgaagaagtccagcctgccccaggatgcctccctgtcctccctg
acccaggaccagctatctctggacggggacacagacagcctgaccacctctccttcctcc
agcagcctggacaccacctggtctggacacaagctggtcaagaccttctctaagtccagc
agcacccacggcctcatccggccccccaggagagtccctgctgggtctgggggtctgggg
accgtgggggtgggaggtagtggatcctccttctcggagctggatggctgtggagcagag
gatgaagagaaggtgtcgtgctccatgacggagggcgagatgcggaaagctctgacctct
ctctcccacggggtaagtaacaacacactctatggcttctacggcctcacccggccacgc
cccaacccacacccccagccccacctcctcgttgccctcgacgacgtctcccagagtagc
cccaaacctgcccgtcaccatgccaactggctcaggaagcccgaccccaattacgcctac
tccaccaaacacctgctctaccagcgctcccggaactatgctaaaccacctggggtgccc
tcctcctgcccctcccccttggcccctgcccgctgtgacctagccaaggctaagggtggt
acgctgggtggaggggggggtgggggctgggcgttcccccctcgcagactccgcggccgg
acggcggtgagcgagctgaacatcacatacgtggtagagcgcagcctctacggccacctc
aactgggcccagctggtccgaccagtcaccctcagccgcgcagagcgccgctgcctattg
gaggaggacagggaggcggacaggaagtgggcagccagcgtggaccgctgcaccaagcgc
gtgctcttacgcatccagcagaagtctaggacgtgtagtttcggagggtttgacctgtcc
aaccggtcgctccatgtggtcagtgcaggctcagagcccaatagtaagaatccagaggct
gtataccgggaggtagtcaagtctcccacgacgtctcgtatctctctgggaaagaaggtc
aagtctgtaaaagagaccatgaggaaacgcatgtccaagaagtacagcagctcactgtct
gaacagtcgagcccagacggtgctcccagctccccccagtccccccagccagacacagat
tctctggagaaacccaaactgaaggctggaggatcagtggagagcctccggagctccctc
agcggacagagctccatgagtggtcagacagtcagcaccacagactcgtcagccagtaac
agagagagtgtgaagtctgaggatggagatgacgaggagcctccctacagagggcccttc
tgtggcagagcacgagtgcacactgacttcacgcctagcccctatgattcagactccctc
aaactaaagagaggggatgtgattgacatcatcagtaagccccccatggggacgtggatg
ggcctgctcaacaacaaggtgggcacctttaagttcatctacgtggacgtgctgagtgag
gaggaggagaagcccaagagacccgtcaggaggaggaggaagggcagacctcccaaaccc
acctctgtagaggagctgctggaacgcatcaacctcaaggagcacatgcctaccttcttg
tttaatggctacgaggacctggacaccttcaagctgctggaggaggaggatctagatgag
ctcaacatcagagaccctcaacacagagctgtgttgctcaccgctgtggagctactgcag
gagtatgacagcagcagcgacccggagcgtagcggcctgtcaggctctcaggagaagctg
ctgtcagagggccacagcctggtgggcgactcgccacgtgactctggctgctacgaaagc
aatgagaacctggataatggcaagagcaggaagacatctcgctccatccactcctccgcg
ggcctccagtccccagactaccccacccttcccatgacccagtccactgaggcactgcag
cagagcaagatggagcgcacagtcaacttcaccaagcacttcttcctcaagcccaccttg
aggggcttcagcatgctggggctgaggaagggcccccgccagacccccatgccggccagt
ctcagctgtgaggacctggacgggccaccggaggccaccggcccccaggcctggaagaga
tctcactccctgggggacctccactgggaacaggccttcgaccagaagaaggaccacagc
ctggaggccaagcccgctaatggtggctccaagttgggcaccagcagcccggtgaagggc
ctccaggctcatggagatgggggttcaccaccggctcagaattgggggagtgctgtgagc
cctaaatggcattctgacctcccccatgtaccttcccagctgcccctcagaccaccctgt
cccatcaccttgctcccccagccccgggagagcctgcccaacccgatctccagccctcct
gaaccccagctgggggagaggagcatccggactcaccccaaaaagcccccagtgccccct
cccgttccaatcaagaagtccaaggagcgcctagccaatgggatgcgccacccctctctg
gtcctctcctcccccactcattcctatacctccacccccaccaactctcatccccccagc
cctgtcatcagcaaccccagtcccagggctccagccctccccagtaaggcctctagtacc
cctgcctccccctctccagccagccctactccagcctcccctgcctccaccgccactgcc
tctccagagccagaggaaccaggcacccccccagccgtgccccctccctggctgtctgac
ctgcccgagtcggcctgccctcaggctcagatccaggggggtggtggcaagatgacggtg
gccaggaaggtgtcccatgttaagatggccgtcgatctccacaatgtgctggagcagaga
ctggaggccgagggcattgacctcacagaggaaccctactcagacaagcatggtcggtgt
ggtatcccccagccccttgtgcagcgctacagtgaagacctggagcagccagtgaaagat
gtggcccgcgcaatagaccaggtccgcgtcaagcagctccgcaagcagcaccgcatggct
atcccgtttggaggtttaacagagatgtgcaggaagcctctctccccgggtcacgtgagc
accgtctctgattggctggtgtccatcggcctgcccatgtacgccacgcccctggagaag
gcaggatatgacacgttggggcatgtgtcatctctcacggagagcggcgtgtgggaggcg
ggggtgcgggacgagaggcatgcccgtagactggtcagcgaagcccgattggtcagcgca
cccagagacgcacagtcgtaa
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