Coregonus clupeaformis (lake whitefish): 121552604 Help Entry 121552604         CDS       T08357                                  Name (RefSeq) CAD protein-like isoform X1   KO K11540   carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:6.3.5.5 2.1.3.2 3.5.2.3] Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu00220   Arginine biosynthesis cclu00240   Pyrimidine metabolism cclu00250   Alanine, aspartate and glutamate metabolism cclu01100   Metabolic pathways cclu01240   Biosynthesis of cofactors Module cclu_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP Brite KEGG Orthology (KO) [BR:cclu00001]  09100 Metabolism   09104 Nucleotide metabolism    00240 Pyrimidine metabolism     121552604   09105 Amino acid metabolism    00250 Alanine, aspartate and glutamate metabolism     121552604    00220 Arginine biosynthesis     121552604  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:cclu01002]     121552604 Enzymes [BR:cclu01000]  2. Transferases   2.1  Transferring one-carbon groups    2.1.3  Carboxy- and carbamoyltransferases     2.1.3.2  aspartate carbamoyltransferase      121552604  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.2  In cyclic amides     3.5.2.3  dihydroorotase      121552604  6. Ligases   6.3  Forming carbon-nitrogen bonds    6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor     6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)      121552604 Peptidases and inhibitors [BR:cclu01002]  Cysteine peptidases   Family C26: gamma-glutamyl hydrolase family    121552604  Metallo peptidases   Family M38: beta-aspartyl dipeptidase family    121552604 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CPSase_L_D2 CPSase_L_D1 GATase CPSase_sm_chain OTCace_N OTCace CPSase_L_D3 MGS Dala_Dala_lig_C ATP-grasp ATPgrasp_Ter DHOase Amidohydro_1 ATP-grasp_3 Peptidase_C26 GSH-S_ATP Motif Other DBs NCBI-GeneID:  121552604 NCBI-ProteinID:  XP_041721497 LinkDB All DBs Position 36:complement(8830710..8857303) Genome browser AA seq 2260 aa AA seqDB search MATLILEDGTTFKGRLFGANASVSGEVVFQTGMVGYPEALTDPSYRCQILTLTYPLQGNY GIPKDEKGDFGLSKWFESSKIHAAALIVGEISQNPSHWSSSMSLDQWLKEQGIPGLEGVD TRSLTKKIREKGTMLGKLVVDGTPEANVPFDNPDQRNLVKEVSMKEPLVFNPSGTIRITA VDCGIKYNQIRCLCQRGACVTVVPWDYPLDSTDFDGLFISNGPGDPQFCKETINNVRKVV CVDNPKPVFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTDRCFITSQNHGFAVD PLTLPQGWDVLFTNANDQTSEGIVHNTKHLFSVQFHPEHMAGPTDLVSLFDVFLDTVRDY KEGKSGKPVKQRLTEHLTYPGSPKPEEFVRPRKVLILGSGGLSIGQAGEFDYSGSQAIKA LKEENIQTVLINPNIATVQTSKGLADKVYFLPLTPEYVTEVIKNERPDGVLLTFGGQTAL NCGVELTKRGVLEKYAVRVLGTPVASIEMTEDRKIFVEKMEEINEHVAPSEAALSVEQAV AAAERLGYPVLVRSAFALGGLGSGFANNSEELTSLVISAFAHTSQVLVDKSLKGWKEIEY EVVRDAYDNCITVCNMENIDPLGIHTGESIVVAPSQTLNDYEYNMLRDTAIKVIRHLGIV GECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPVLKNSV TNQTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQKALR MVDENCVGFDHTIKPVSDEELQTPTDKRIFVLAAALRAGYTVDRLYDLTKIDRWFLHKMK NIADHEKVLESYNQDESAMPLGVMRKAKQLGFSDKQIALAVQSTELAVRKLRRDWSILPV VKQIDTVAAEWPAHTNYLYLTYNGTESDLGFSEPHVMVIGSGVYRIGSSVEFDWCAVGCI MELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYEMENPEGVILSMGGQL PNNIAMSLHRQQCRILGTSPEFIDSAENRFKFSRMLDTIGISQPLWKELTEIESAMKFCE TVGYPCLVRPSYVLSGAAMNVAYTDSDLEKYLSSAVAVSKEYPVVISKFIQEAKEIDVDA VACDGVVMAIAVSEHVENAGVHSGDATLVTPAQDINQKTMERIKMIVHAIGQELQVTGPF NLQLIAKDDQLKVIECNVRVSRSFPFVSKTLGVDLVSLATRVIMGEEVEPVGLMKGVGIV GVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNILLSI GSYKNKSELLPTVQALESLGYDLYASLGTADFYTEHGVKVIAVDWPFEEEESDCPNKDKQ RNILEYLEDHHFDMVINLSMRNSGGRRLSSFVTKGYRTRRMAIDYSVPLIIDIKCTKLFF QALRLVGGFPPVKTHVDCMTSQKLIRLPGLIDVHVHLREPGATHKEDFSSGTAAALAGGI TMVCAMPNTAPAIIDPSSLTMVQKLAKAGCRCDYALYVGAASDNAAILSSIANSVAGLKM YLNDTYSTLKMDNVSLWMEHFEKWPKHLPIVAHAEKQTVAAILMVAQLYQRAVHICHVAK KEEILIIRAAKQKGIQVTCEVAPHHLFLCEEDVAHIGDARAQVRPMLGTREDMEALWEHL DIIDCFATDHAPHSVEEKNSEKPPPGYPGLETMLPLLLTAVSDGRLTIDDIIKRLYDNPR KIFSLPTQDNTYVEVDLEQEWVIPKHMQFTKSKWTPFEGMKVKGKVRRVVLRGELAYIDG QVLVPPGYGEDVKTWPAPIPIQPPEPVKEVPQTPEHPRLIPPCEGIRTRAPSPRRSAGDG RYMLPPRVHRSSDPGVPPGFRTIHTKWRLDFVAEDSRGRAFEEGLREEMAHSAGDGYSHP PPLARILSPWAEAGLGVVAGQPQTLTHLQTSPLLHPLVGQHVLSVRQFSKEQISHLFNVA HTLRLMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMQRLGGSVVHFCEATSSSQKG ESLADSVQTMSCYADVLVLRHPMPGAVESAARHCRKPVINAGDGVGEHPTQALLDVFTIR EELGTVNGMTITMVGDLKHGRTVHSLARLLTQYRITLRYVAPKNLHMPSEIIDFVASKGI KQEEFESIEEALPDTDVLYITRIQKERFASEEEYKACFGQFILTPHIMTGAKRKMVVMHP LPRVNEISAEVDTDPRAAYFRQAENGMYIRMALLATVMGR NT seq 6783 nt NT seq  +upstreamnt  +downstreamnt atggcaaccctgattttagaagatgggaccaccttcaagggccgccttttcggggcaaac gcgtcggtatctggtgaagttgtgttccagacaggcatggtgggctacccagaggccctg actgacccgtcctacaggtgtcagattctcaccctcacctaccctctgcagggcaactat ggcatacccaaggatgagaagggtgactttggactcagcaagtggtttgagtcttctaag atccacgctgcagccctcatcgtaggagagatctcccagaaccccagccactggagctca tccatgtctctggaccagtggctcaaagagcagggcatccctggcctagagggagttgat acccgtagtctgaccaagaagatccgtgagaagggaaccatgctggggaagctggttgtg gacggaacgccggaggccaacgttccatttgacaaccctgaccagaggaacctggtcaag gaggtgtccatgaaggagcccctggtgttcaaccccagtggtactatcaggatcacagca gtagactgtggcattaagtacaaccagatccgatgcttgtgtcagagaggggcctgtgtc accgtggtgccctgggattacccactagacagcacagattttgatgggctgtttataagc aacggccctggggacccccagttctgtaaggagaccataaacaacgtgaggaaggtggtg tgtgtggacaaccccaagcctgtgtttggtatctgcctgggccaccagcttctctccctc gtcatcggcgcaaaaacctacaaaatgaagtatgggaatcgtggccataaccagccctgc atccacaagggcacagatcgctgtttcatcacctctcagaaccatggctttgctgtggac cctctcaccctgcctcagggctgggatgtactcttcaccaatgccaatgaccagaccagt gagggcattgtgcacaacaccaaacacctattcagtgtccagttccacccagagcacatg gcaggccccactgacctggtcagtctgtttgatgtgtttctggacacagtcagagactac aaggagggcaagagtggcaaaccagtgaagcagagactgacggagcacctgacctaccct ggttctcccaagccggaggagtttgttcggccacgcaaggtcctgatcctgggctctgga ggcctctccatcggacaggctggggagtttgactactctggctctcaggccataaaagca ttgaaggaggagaacattcagactgtgctcattaaccccaacattgccacggttcagacc tccaagggactggctgacaaggtctacttcctgcctctcaccccagagtacgtcactgag gtgataaagaatgagcgtccagatggggtccttctgaccttcggggggcagactgctctg aattgcggggtggagctgaccaagaggggggtcctggagaagtatgcggtgcgtgtgctg gggacgccagtggcctccatcgagatgactgaggacagaaagatctttgtggagaagatg gaggagatcaatgaacatgtggcgcccagcgaggctgctctgtctgtggagcaggcggtg gcggctgcagagcgtcttggctaccctgtcctggtgcgctctgcctttgccttgggcgga ctgggctctggctttgccaataacagtgaggagttgacctctctggtgatctctgccttc gcccacacctcccaggtcctagtggacaagtccctgaagggctggaaggaaattgagtat gaagtggtcagagacgcctacgacaactgtatcaccgtatgtaacatggagaacattgac cctctgggtatccacactggggagtccatcgtggtggcgcccagtcagactctcaacgac tatgagtacaacatgttgagggacaccgccatcaaggtcatcagacacctgggcatcgtg ggagagtgtaacatccagtacgccctcaaccctgagtctgaacagtactacatcattgaa gtgaatgcccgtctgtctcggagctcagctctggccagtaaagctacaggatatcccctg gcctacgtggctgccaagttgggtctgggcatccctctacctgtcctcaagaactctgtg accaaccagaccacggctaactttgagcccagtctggactactgtgtggtgaaggtccct cgctgggatctcagcaagttcctccgtgtcagcaccaagataggcagctccatgaagagc gtgggtgaggtgatggccattggccgcagctttgaggaggccttccagaaggctctgcgg atggtggatgagaattgtgtgggatttgaccacaccatcaaaccagtgtctgacgaggag ctgcagaccccgacagacaagcgtatctttgtgctggcagctgctctgagggcaggctac acagtggaccgcctgtacgacctgaccaagatcgaccgctggttcctccacaagatgaag aacatcgcggaccatgagaaggtgctggagtcgtacaaccaggacgagagcgccatgcct ctgggggtgatgaggaaagccaagcagctgggcttctcagacaaacagatcgccctggct gtgcagagcacggagctggcggtgaggaagctgcgacgtgattggagcatcttgccggtg gtgaagcagatcgacactgtggcagcagagtggccagcccacaccaactacctgtacctg acctataacggtacagagagtgacctgggcttcagcgaaccccacgtaatggtgatcggc tccggagtgtaccgcattggcagcagtgtggagtttgactggtgtgctgtgggctgcatc atggaactcaggaagatgggctataaaaccatcatggtgaactataacccagagactgtc agcacagactacgacatgtgcgaccgcctctacttcgatgagatctcctttgaggttgtg atggacatctatgagatggagaacccagagggagtgatcctgtccatggggggccagctg cccaacaacatcgccatgtccctccacaggcagcagtgtcgcatcctgggcacctccccg gagttcatcgactctgctgagaacaggttcaagttctcccgcatgctggacaccatcggc atcagccagcccctgtggaaggaactcacagagattgagtcggctatgaagttctgtgag accgtgggctacccgtgtctggtgcgtccctcctacgtgctgagtggagcggccatgaat gtggcgtacacagacagcgacctggagaagtacctgagcagcgctgtagccgtgtccaag gaataccccgtggtcatctctaagttcatccaggaggccaaggagatagacgtggatgcg gtggcgtgtgacggtgtggtgatggccatcgccgtgtcagagcacgtggagaacgccggg gtgcactctggggacgccaccctggtcacgcccgcccaggacatcaaccagaagaccatg gagcgcatcaagatgatcgtccacgccatcggtcaggagctgcaggtcaccgggcccttc aacctgcaactcatcgctaaggatgaccagttgaaggtgatcgagtgcaacgtccgagtc tcgcgctctttcccgttcgtctcgaagacgctgggagtggatctggtctccctggcaaca cgtgtcatcatgggagaggaggtggagcctgtgggcctgatgaaaggagtgggcatcgtg ggcgtcaaggtcccccagttctcgttctctcgtctggccggggctgatgtggttctgggg gtagagatgaccagcactggggaggtggcctgctttggagagaacagatacgaggcctat ctgaaggccatgctcagcacaggcttcaagatccccaagaagaacattctgctttccatc ggcagttataagaacaagagtgagctgctgcctactgttcaggctctggagagtctgggc tatgacctgtatgccagcctagggaccgctgacttctacactgagcatggagtcaaggtg atagcagtggactggccgtttgaggaggaggagagcgactgccccaacaaggacaagcag aggaacatcttggaatacctggaggaccaccactttgacatggtcatcaacctctccatg aggaactctggaggccgacgcctctcctccttcgtcaccaagggttaccgcacccgccgc atggccatcgactactcagtccccctcatcattgacatcaagtgcaccaagctctttttc caggcgttgcgtctggttggaggctttccgcccgtcaagactcacgtggactgtatgacg tcacagaagttgattcgcctgcctggtctgatagatgtgcacgtccaccttcgggagccg ggtgccactcacaaggaagacttctcctcaggcacagcggctgccctggcagggggcatc accatggtgtgtgccatgcccaacacggcacccgccatcatcgaccccagctccctcacc atggtccagaagcttgccaaggcagggtgtcgctgtgactatgccctctacgtcggggcg gcttcagacaacgctgccatcttgtcctccattgccaactccgtcgctgggctgaagatg tatctgaacgacacctactccactctgaagatggacaacgtctcactttggatggagcac tttgagaagtggcccaagcacctaccaatcgtggctcacgcagagaagcagacagtggca gccatcttgatggtggcccagctgtaccagagagctgttcatatctgccacgtggccaag aaggaggagatcctgatcatccgcgcagccaagcagaaaggcatccaggtgacgtgtgaa gtggcgccccaccacctcttcctgtgtgaggaggacgtggcgcacatcggtgacgcccgg gcacaggtacgccccatgctgggaacccgggaggacatggaggccctctgggaacatttg gacatcattgactgcttcgcaaccgaccacgccccccattcagtggaggagaagaactca gagaagccccccccaggctaccccggcctggagaccatgctgcccctcctcctcaccgcc gtcagcgacgggcgcctcaccatcgacgatattatcaagcgcctgtacgacaacccccgc aagatcttctccctgcccacacaggacaacacctatgtagaggtagacctggagcaggag tgggtcatccccaaacacatgcagttcacaaagtccaagtggacgcccttcgaaggcatg aaggtgaagggcaaggtccgcagagtggtgctcagaggagagttggcctacatcgacgga caggtgctagtccctcctggctatggggaggatgtgaagacttggcctgcacccatcccc atccagccccctgaacctgtgaaagaagtcccacagaccccagagcacccccggctgatc ccgccgtgtgagggcatccgtacccgcgccccgagccctcgccgctctgctggggatggc cgctacatgctcccgccccgtgtccacaggtcctccgacccaggcgtgcctccaggtttt aggacaatacacacaaaatggcgcttggatttcgttgctgaagattcaaggggaagagca tttgaagaaggtttaagagaagagatggcccattcagctggggacggctacagccatccc cctccactggccaggatcctgtccccctgggctgaggcagggttgggggtagtggcaggt cagccccagaccctgacccacctccagacctcccccctactgcaccccctagtgggacaa cacgtcctctctgtcaggcagttcagcaaggaacagatctctcacttgtttaacgtggcc catactcttcgcctgatggttcagaaagagagaagcctagacatcctgaagggtaaggtg atggcgtccatgttctacgaggtcagcacgcgcaccagcagctcgtttgcggcggccatg cagcgtctgggcggctctgtggtccatttctgcgaggccacctcctcgtcgcagaagggc gagtctctggccgactcggtccagaccatgagctgctatgctgacgtcctggtgctgcga caccccatgccaggggccgtagagtctgcagcgaggcattgccggaagccagtgatcaac gctggggatggggtcggggagcaccccactcaggccctgctggatgtgttcaccatcaga gaggagctgggcacggtcaacggcatgacgatcactatggtaggggacctgaagcacggc cgcacagtgcattccctggccaggctgctcacccagtacagaatcacactgcgctacgtc gccccaaagaacctgcacatgccctccgagatcatcgactttgtggcctccaaaggcatc aagcaggaagagtttgagagcatcgaggaggcactgcctgacactgacgtgctctacatt accaggatccagaaggagaggttcgcctcagaggaagagtacaaagcgtgcttcggtcag tttatcctcaccccacacatcatgactggagccaagaggaagatggtggtgatgcatcct ctaccgagagtcaatgagatcagtgcggaggtggacactgatcctcgtgctgcctacttc cgacaggctgagaacggcatgtacatccgcatggccctcctggccacagtgatgggtaga tga

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