Coregonus clupeaformis (lake whitefish): 121552891
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Entry
121552891 CDS
T08357
Name
(RefSeq) heat shock factor protein 2-like
KO
K09415
heat shock transcription factor 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121552891
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
121552891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Vert_HS_TF
HMMR_C
Motif
Other DBs
NCBI-GeneID:
121552891
NCBI-ProteinID:
XP_041721918
LinkDB
All DBs
Position
36:complement(16942821..16946690)
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AA seq
493 aa
AA seq
DB search
MKQNSNVPAFLTKLWTLVEDSDTNEFICWSQEGNSFLVMDEQRFAKEILPKFFKHNNMAS
FVRQLNMYGFRKVMHIDTGIVKQERDGPVEFQHHYFKHGQDDLLENIKRKVSNARPDDTM
IRQEDLSNILASFQNVHGKQESIDSRLNTLKRDNEGLWREISDLRQKHSQQQQIIKKLIE
FIVTLVQKNRMSLKRKRPILLNSNGKKPKYIHEIYDEPPLDHNKPSVSGLKSTDLTDDVI
ICDVTDDDTEIIEGPSRVLDQSDVEIVEVFNSNTVSQTDSVDNIGQTNSLVIEPEETTIS
TYDSLPTSSTLQLNKPSGLSLEDPMKMMDSILNESGAISQNINLLGKVELMDYLDSIDCS
LEDFQAMLYGKQFSIDPDILEGSGGGGSKENAGLLSKGGKSGFSADNQLVQYTSCPLLAF
LDGCTPLATEGDSLLQHSTEVPTDLLEPDEEPPRSSLIRLEPLTEAEASEATLFYLCELN
PEGDTTDSTQLEI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaactcaaatgtaccagcctttctcacaaagctttggactcttgtggaggat
tctgacaccaatgaatttatttgttggagtcaggagggtaacagtttccttgtcatggat
gaacagcgatttgccaaggagatccttcccaagttcttcaagcacaacaacatggccagc
tttgtcagacagctgaatatgtatggatttcgcaaagtgatgcacatcgacacaggcata
gtaaagcaagagcgggatggaccagttgaatttcagcatcattactttaaacatggtcag
gatgacttgctggaaaacataaaaagaaaggtttccaatgcaagaccagatgataccatg
atcagacaggaagacctgtccaatattttggccagtttccagaatgttcacggaaaacaa
gaaagcattgattctagactcaacacactgaaaagagataatgaaggtctatggagggaa
atatcagacctgagacagaagcactcccaacagcagcaaatcattaagaagttgatagaa
ttcatcgtcacattggtacagaagaaccgaatgagtttaaaacgcaagaggcctattcta
ctgaacagcaatggaaagaagcctaaatacatccatgaaatctacgatgaacctcctctg
gaccacaacaaaccctctgtcagtggtttgaagagcactgatcttactgacgatgtcatc
atctgtgatgtaactgacgatgacacagagatcatagagggcccctcaagagtattggat
caatcggatgtagaaatagttgaggtcttcaacagcaatactgtgtcacagacagacagc
gttgacaatataggacagaccaactctttggtaatcgaaccagaagagaccaccataagc
acatatgatagccttcccacaagcagcaccttgcagctcaacaaaccgtcaggcttgagc
ctagaggatcccatgaagatgatggactcaatcctcaatgagagtggagctatttctcag
aatatcaacctcctcggcaaggttgagctgatggactacttggacagcattgactgcagt
ttggaagactttcaggctatgttgtacgggaagcagttcagcattgatccagatatttta
gaggggagtggtggtggtggttccaaagaaaatgcagggctgctatccaaaggaggcaag
tctggtttctctgcagacaaccagctggtccagtacacatcctgccctctgctggccttc
ctggatggctgcacccctttggccacagagggagacagcctgctgcagcacagcactgag
gtgcccacagacctcctggagccagacgaggagcctccacggagctctctgatccgcctg
gagcccctgactgaggcagaggccagcgaggcaacgctcttctacctgtgtgaactcaac
ccagagggtgacactactgactcgacacagctggagatttaa
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