Coregonus clupeaformis (lake whitefish): 121554861
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Entry
121554861 CDS
T08357
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121554861
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
121554861
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
TPR_7
TPR_12
TPR_19
Motif
Other DBs
NCBI-GeneID:
121554861
NCBI-ProteinID:
XP_041724505
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All DBs
Position
40:10895001..10924627
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AA seq
1266 aa
AA seq
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MMEPQEEKPIIYTMENKPIVTCAGDQTLFTTLYTHLAQQLPREPMEWRRSYGRAPKMIHL
EANFVQFKEELLPKEGNKTLLTFPFLHIYWTDCCDTEVYKASVRDDMMRWQGNLRLHGSA
DWVIVVVETSDAKKKNKTNILPRSSLVDKIRNDFCNKQNDRCVVLSDPLKDSSRSQESWS
AFLLKLRTLLLMSFTQNLGRFEDDMRTLREKRNQPGWSFCDYFMVQEELAFVFEMLQQFE
DALIQYDELDALFTQYVLNFGAGDGANWLGSFCSPVKSWTGLLLRQPIDMEKRDGIQRGQ
ASLLELRSYLFCRQCTLLIFLQRPWEVTQRALELLQNCVQELCLLEVSMLEGALDCWVFL
SCLEVLHRIEGCCDQAQLEANVSHTVGLWAYATDKLKSLGYMCGLVSEKGPLSLELNRTV
DLLAGLGDEKPETVHSLQSPYKKLKEALSSVEAFERHYLELSHAAVEMYRAIGRMRSALL
VGKSLAEFYMRKGDPEQAEGFLQDALRSYVSEGWSIPVTHTRKQMAECQKLLGRTENYLQ
TSALLAGDANLTNEERIHFCQEILTFANQSTDSKAQKVALSMSLFAQLTQLQFRPATATV
HSGAALQVELCLRSLMPVAVPLEQLSVSVHLNLEQGGTNGKTRGPQRRPYPGTVLFPLDN
SSGMPPSTAGPSLELEEIQDRSPSDPRTLNSAGMVCKNTHLVMRRHDSSPSPDTPNLLSP
VPVVVDDGAQILMSGDVTLLPGNNSIVFSVPSQEPGTYTLRQLCATVGQVQFVLPHISPL
VQYEVYSQEPQLTVEPLTDQLLAGLAQRAKVRLQTGHYTVKKGDALQLTNMDTMAILSTS
SCPATILNSTAERVGESVLSIQSSEKVTSISLPPTPPYHTLEFQLEVLSVIPSGPDRPEN
QRLTNGEIRHRPRSYSHPDNHMTAINQRISIDCPWSIYSTTISLTFYIPFKAKHSLLSAG
DRKYIQVCLQNVSDMNFHLMDQRLTEKHQESSLELQSLNTKAQQLVCGQQSVYCLWDVRW
KEDMPLCLQCVFSASFSAASDEVSAFKPYHYEFQLERVTTLYSVRAEITPAAGEKHCHSG
SLCGLEMSITRLAEPDDDDDDDENDGETDEVCSSKLMYEVADSGGSWVVCGRSSGLVSMP
ADANANHRVQVELMPLFAGHLPFPDIKVFKYLPPSANSASQPDTDGCVENDTLSLLDRPL
DDQGDTASIRSRGSVHSVGSGEQQPRGLPMPRLEPFSRGQVFNHSQGCQVLVLPSTDDHV
LEINAT
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcctcaagaggagaagcccattatttacacaatggagaacaagccgattgtg
acatgcgctggggaccagaccttgttcacaactctctacacccatttggcccagcagctt
cccagggaaccaatggagtggaggaggtcgtatggacgagcaccaaagatgatccatcta
gaggccaactttgtccagttcaaagaggagctcctccctaaagaaggaaacaaaactctc
ctcaccttccctttcctccatatctactggacagactgctgtgacacagaggtgtacaag
gcgtcagtgagggacgacatgatgaggtggcagggcaacctgcggctccacgggtcagct
gactgggtcatcgttgttgtggagaccagcgatgccaagaagaagaacaagaccaacatc
ctgcctcgctcctccttagtggacaagatccgcaatgacttctgtaacaagcagaacgac
cggtgtgtggttctgtcagaccctctaaaggactcgtccaggtctcaggagtcgtggagt
gccttcctgctaaagctgaggactctgctgttgatgtccttcactcagaacctgggacgc
ttcgaggatgacatgcgcacactccgggagaaacgcaatcagcccggttggagcttctgt
gactacttcatggtacaggaggagttggcctttgtgtttgagatgctgcagcagtttgag
gatgctctgatccagtatgacgagctggatgcgctcttcactcagtatgtccttaacttc
ggggctggagatggggccaactggctgggatccttctgctccccggtgaagagctggacc
ggcttgctcctgcggcagcccatagacatggagaagagagatgggatccagcgcggccaa
gctagcctgctggagctacgcagctacctgttctgtcggcagtgtaccctgctcatcttc
ctccagaggccctgggaggtgacacagagagccttggagctgctgcagaactgtgtccag
gagctatgcctgctggaggtgtctatgctagagggggcgttagactgctgggtcttcctc
agctgcttggaggttctgcaccgtatagaaggctgctgtgaccaggcccagctagaggct
aatgtctcccacacggtgggcctgtgggcctatgctactgacaagctgaagtctctgggt
tatatgtgtggtctggtgtcagagaagggtccgctgtctctggagctgaacagaactgtg
gacctgctggctggactgggggatgagaagcctgagactgtccacagcttgcagagcccg
tataaaaaactgaaggaggccctgtcttctgtggaggcgtttgagagacactatcttgag
ttgtctcatgctgctgtggagatgtacagggccatcggcaggatgaggtcagcgctgctc
gttggaaagagcttggcagagttctacatgaggaagggtgaccctgagcaggcggagggc
ttcttgcaggatgctctgaggtcatacgtgtcagagggatggagtatacctgtcactcac
accaggaagcagatggctgagtgccagaaactgctggggaggacagagaactacctgcag
acaagcgccttgttggcaggtgatgccaatctgaccaatgaggagaggatccacttctgt
caggagatcctgaccttcgccaaccaatcaacagacagcaaggcccagaaggtggcgctc
agtatgagtttgttcgcccagctcacgcagctgcagttccgcccggcaacagccacggtg
cactctggcgccgccctgcaggtggagttgtgtctgcgcagcctgatgcctgtggctgtg
cctctggagcagctgtctgtcagtgttcacttaaacctggagcagggagggactaatggg
aagaccagggggccacagagacggccatacccagggacggtgcttttccccctggataac
tcctcagggatgcccccttccactgctggtccttctctggagctggaggagatccaggac
cgcagcccctcggaccctcgtacgctcaactccgccggcatggtgtgtaagaacacacac
ctggtcatgcgtcgtcatgacagcagcccgtcaccggacacgcccaaccttctcagccca
gttcctgttgtcgtggatgacggggcacagattctaatgagcggtgatgtcactctgctg
ccaggcaacaacagcattgtcttcagtgtgccaagtcaggagccgggtacctacacattg
cgtcagctgtgtgccacagtgggccaggtccagtttgtcctgcctcacatctctcctctg
gtccagtatgaggtctattctcaggagccccagctcaccgtggagcccctcacagaccag
ctgctggcaggcctcgcccagagggcaaaggtcaggctgcagacaggtcactacactgtg
aagaagggagacgccctgcagctcactaacatggacaccatggccatcctctccacctcc
tcctgccctgctaccatcctcaacagcactgcagagcgtgtgggtgagagtgttctgtcc
atccagtcgtctgagaaggtgaccagtatctctctacctcccacgcctccctaccacacc
ctggagttccagctggaggtgctgtctgttatcccttccggccctgaccggcccgagaac
cagagactcacaaacggggagatacgccaccggccccggagctacagccaccccgataac
cacatgaccgccatcaaccagaggatctccatagactgtccctggtccatttactccact
actatatccctcaccttctacatcccctttaaggccaagcactcactactatcagcaggg
gacaggaagtacatccaggtgtgtctgcagaacgtgtcagatatgaactttcacctgatg
gaccagaggctaacggagaaacatcaggagtcctctctggagctgcagtctctcaacact
aaagcacaacagttggtgtgcggtcagcagagtgtatactgcctatgggatgtgaggtgg
aaggaagacatgccactctgtctacagtgtgtgttctctgccagcttctctgctgcttct
gatgaagtctcggccttcaaaccctaccactacgagtttcaactggagagagtgacaacg
ctgtacagcgtgagggcagagatcacgcctgcggctggtgaaaaacactgtcactccggc
tccctctgtgggctggagatgtccatcacacgactggctgaacctgatgatgatgatgat
gatgatgagaatgatggagagactgatgaggtctgctcctccaagctcatgtatgaagtg
gcagacagcggcggtagctgggtggtgtgtgggagaagctcaggactggtgtccatgcca
gcggatgctaatgccaaccacagggtacaggttgagttgatgcccctgttcgctggccac
ctgccattccctgacatcaaggtgtttaagtacctgcctcccagtgctaactccgccagc
caacctgatacagacggctgtgtagagaacgacaccctctccttgctggaccggcctctg
gacgaccagggggacacggctagcatccgtagccggggaagtgtccactctgtgggcagc
ggggagcagcagcccaggggtctccccatgcctcgcctggagcccttcagccggggacag
gtcttcaaccacagccagggatgccaggtcctggtgctgccctctacggatgaccacgtt
ctggagatcaatgctacgtga
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