Coregonus clupeaformis (lake whitefish): 121554951
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Entry
121554951 CDS
T08357
Name
(RefSeq) nck-associated protein 1 isoform X1
KO
K05750
NCK-associated protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04810
Regulation of actin cytoskeleton
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121554951
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121554951
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Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
121554951
NCBI-ProteinID:
XP_041724595
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Position
40:21175427..21243491
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AA seq
1141 aa
AA seq
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MSATLSRGSLQPGQQKLAEKFTILNDRGIGMLTRVYNIKKQGQVWKACGDPKAKPSYLID
KNLESAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCEL
LNTIDACQVFFDITVNFDLTKNYLDLVVTYTNLMMLLSRIEERKAIIGLYNYAHEMTHGS
SDREYPRLGQMIVDYENPLKKMMEEFVPHGKSLSDALLSLQMVYPRRNLSADQWRNAQLL
SLISAPSTMLNPAQSDTMPCEYLSLDAMEKWIVFGFILCHGVLNSDQAALSLWKLALQSS
TCLCLFRDEVFHIHKAAEDLFINIRGYNKRVNDIKECKEQALSHAGLMHRERRKFLRSAL
KELATVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNIQKKSTDDFIDKHIAELIF
YMEELRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSL
GVKQGVTVEDGDVFDFRGMRLDWFRLQAYTSVSKASLGIADHRELGKMMNTIIFHTKMVD
SLVEMLVETSDLSIFCFYSRAFEKMFQQCLELPSQSRHSISFPLLCTHFMSCTHELCPEE
RHHIGDRSLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKK
QTGKKGEPEREKPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMVIWEHTFTPREY
LTSHLEIRFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNN
VLLQQTQHLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNA
EEYSDISEMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVMDNVEVLTQMRTSFDKP
GEMAALFKKLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSCHIPFLVSSVEDFKDHIP
RETDMKVAMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSM
PTLASNVMSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLL
KIGQETDKTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVPSS
T
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaacattgtcgcgcggctcgctccaaccgggccagcaaaagctggcggagaaa
tttaccattctgaatgacaggggcatcgggatgctcactcgagtctataatatcaagaag
caaggacaagtttggaaggcatgtggtgaccccaaagccaaaccatcctatctaatagac
aagaacctggagtctgctgtcaagttcattgtcagaaaattcccagcggttgaaacacgc
aacaacaatcaacagcttgcacaactacaaaaagagaagtctgaaatccttaagaatcta
gcgttgtattacttcacattcgtagatgtgatggagtttaaggaccatgtctgtgagctg
ctgaatactatcgatgcttgccaagtattctttgatattactgtaaactttgacctgacc
aaaaactaccttgacttggtagtgacctacactaacctaatgatgctactgtcgcggatt
gaagagaggaaagctatcattggcctctacaactatgcccacgaaatgacacatggatca
agtgatcgagagtaccctaggctgggacagatgatcgttgactacgagaacccactgaaa
aagatgatggaggagtttgttccacatgggaagtcgttgtcagacgccctgctctccctc
cagatggtgtaccccagacgaaacctgtctgctgaccagtggaggaacgcgcagctactc
agtctcatcagtgctcctagcaccatgctcaacccagcccagtcagacacaatgccctgt
gaatacttgtccctggacgcaatggagaagtggatagtatttggcttcatcctgtgtcat
ggggtcctgaacagtgaccaggcagctctgagcctgtggaagctggctcttcagagcagc
acctgcctctgtctcttcagagacgaggtgttccacatccacaaggctgctgaggacctc
ttcatcaacatccgcggttacaataagcgtgtgaatgacatcaaagagtgcaaagaacaa
gcgctgtcacatgcaggcttgatgcacagagaaagacgcaagttcctgagatctgccctg
aaggagctggccacagtcctatctgaccagccaggattactggggcctaaagccctgttt
gtattcatggctctgtcgttcgctcgggatgagatcatttggctgctacgacatgcagac
aacatccagaagaagagcacagacgactttattgacaagcacattgcagagctgatcttc
tacatggaggagctgagggcccatgtgaggaagtatggtcctgtcatgcagaggtactac
gtccagtacctgtctggcttcgatgccgtggtgctcaacgagctagtacagaatctgtcc
gtctgtcctgaggatgagtccattatcatgtcctccttcgtcaacaccatgacctccctc
ggcgtcaaacaaggtgttacagtggaagacggggacgtgtttgatttcaggggcatgagg
ctggactggttcagattgcaggcctataccagcgtgtccaaggcttctctgggcatcgca
gaccaccgtgagctgggcaagatgatgaataccattatattccacaccaagatggtggat
tccctggtggagatgctggtggagacatctgacctctccatattctgcttttacagtcgt
gcatttgagaagatgttccagcagtgtttggagctaccctcccagtctcgtcactccatc
tccttccctctgctctgtacccacttcatgagctgcacccatgagctctgtcctgaggag
aggcaccacataggcgaccgtagcttgtccctgtgcaacatgtttctggatgagatggct
aaacaggcccgcaacctgatcacagacatctgcaccgagcaatgcacgctcagcgaccag
ctgctgccaaaacattgtgccaaaaccatcagtcaggcggtgaacaagaagtcaaagaag
cagactgggaagaaaggcgagcctgagagagagaagcctggagtagagagcatgaggaag
aacaggctgctggtcaccaacctggataagcttcacacagcgctatctgagctgtgtttc
tccatcaactacgtacccaacatggtgatatgggaacacaccttcactcccagggagtac
ctcacctcacacctagagatacgcttcaccaagtctatcgtggggatgaccatgtataac
caggccacccaggagatagccaagccgtctgagctgctgaccagtgtcagggcctacatg
actgtgctccagagcatagagaactatgttcagatagatatcaccagggtgttcaacaac
gtgctgctgcagcagacacaacatctggacagtcacggagaaccaaccatcaccagcctc
tacaccaactggtatctggagaccttactgcgccaagtgagtaacggacacatagcttac
ttcccagccatgaaggcttttgtcaacctgcctacggagaacgagctcaccttcaatgca
gaggaatactctgatatctcagagatgcggtcactgtcagagctgctggggccctacggg
atgaagttcctcagtgagagtctcatgtggcatatctcctcccaggtggctgagctcaag
aaactggtgatggacaacgttgaggttttgacccagatgaggaccagctttgacaagcct
ggagaaatggctgctctgttcaagaagctctcatcagtcgacagtgttctgaaaaggatg
accattatcggcgtcatcctctcattccgatccctggctcaggaggcactccgagatgtg
ttgtcatgccacatcccattcctggtgagctcagtggaggacttcaaggatcacattcct
agagagaccgacatgaaggtggccatgaacgtgtatgagctgtcctctgcagcaggcctg
ccctgtgagatagaccctgccttagtggtggccctctcctcccagaagtcagagaacatc
agtcctgaggaggagtacaagatagcgtgcctgctgatggtctttgtggcagtctctatg
cccaccttggcaagcaacgtcatgtcccagtatagccctgctattgaaggtcactgcaac
aacatccactgtctggctaaagctataaatcagatcgctgcagctttattcaccattcac
aagggcagcatcgaggaccgcctcaaagagttcctcgcacttgcctcctccagtttgctg
aagatcggccaggagactgacaaaaccacaacaaggaacagagaatctgtctacttgctc
ctggatatgattgtgcaggagtccccgttcctgaccatggaccttctggagtcctgcttc
ccatatgtgctgctccgtaacgcataccacgccgtctacaagcagagtgtgccttcctcc
acctga
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