Coregonus clupeaformis (lake whitefish): 121555328
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Entry
121555328 CDS
T08357
Name
(RefSeq) attractin-like isoform X1
KO
K24332
attractin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cclu04091
]
121555328
Lectins [BR:
cclu04091
]
C-Type lectins
Others
121555328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
EGF_LMN_ATRN
Kelch_4
Kelch_5
PSI
CUB
Kelch_6
Kelch_2
EGF_TEN
NANM
EGF_Teneurin
EGF_laminin
PSI_integrin
EGF_2
DOMON
Motif
Other DBs
NCBI-GeneID:
121555328
NCBI-ProteinID:
XP_045068827
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MDGAIRRRACCDAGCSRSLSLSSGLVEVGGRGLMLQTLLLFSAFGLLLGLPAITDAKECD
KPCMNGQCNTATGNCVCSPGWVGDQCQHCGGRFRLTGPSGFLTDGPGNYKYKTKCTWLIE
GTPDSILRLRLDHFATECSWDHLYVYDGDSIYTPLLAAFSGLIVPERYGNETVPEVVSQS
GYALLHFFSDAAYNLTGFNISYRVNTCPNSCSGRGECRVGNSTGAVYCDCDANWKGEACD
IPYCLSDCGWPDRGHCSQDTKTCRCQPGWQGPDCSVSVPANSSFWQREEYPEPGLARASH
KAVVDQGVMWVIGGYVFNSSDYQMVKAYNLSSQRWLSLNRSVNSVMGRYGHSLALHEGKI
YMYGGKIDSTGNVTSQLWVFHIQNQTWVSLSARSQDQWAVVGHSAHVVPPLLEGGSPVML
VLFGHCPQYGYISQVQQYNLAKNTWSAVVTGGALVQGGYGHSSVFDPSSRAIYIHGGYKA
TSATKYGLAGDLYKYDVDRSRWTVLKDSGFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHG
AKCFSSDFMAYDLACDEWSVLPRPDLHHDVNRFGHTAVYSDSVMYVFGGFNSLLLSDILM
YTPASCSSAPNAAVCAANWLGVHCLWNATLGTCLPWDSNPGPLDEQTALASCGTRTYADN
DRCDQYTDCYSCTANTNGCQWCAVQCVSVSSNCTAVTGAIVEYDVCPKDNPSYVCNKKTS
CKSCGVDQNCQWEPRNQECISLPENICGENWHLVGNSCLKFITAKDSYDNAKLTCRGHNA
VLASLTNQKKVDFVLKELQIMSVLYKASVTPWVGLRKINVSYWCWEDMSPFTNTSLQWLP
GEPSDAGFCGYLAEPASSGLKAQTCINPVNGSLCERAANHSAKQCRTPCAMRATCSDCTS
SSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYTMNSCPPENCSGYRTCGQCLEQPGCGW
CTDPSNTGRGQCIEGSYRGPFQTAVPAPSTLPGPASSLASLPALNISMCPYDTKYNWSFI
HCPACQCNGHSQCVNQTVCEKCEDLTTGRHCESCISGYYGDPTNGGSCQLCKCNGHASIC
NPNNGKCFCTTKGIKGDRCHLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEEDRYYT
AINFVATPEEQNRDLVVFINASKNFNLNITWAASFTAGTQTGEEIPIVSRSNIKEFKDSF
SNENFDFRNNPNITFFVYVSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFR
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggacggggcgatacggcggagggcctgctgtgatgctggctgcagccggagcctgagc
ctgagcagcgggctggtggaggtcggtggccggggcttgatgctccaaacactgctcctt
ttctccgcgttcggcctgctccttggactgcccgctatcaccgatgcgaaagaatgcgat
aaaccgtgcatgaatgggcaatgcaacacggcaacgggcaactgtgtgtgcagccccggc
tgggtcggggaccaatgccaacactgcggaggaaggttcaggttgacgggcccctcaggg
ttcctgacagacggaccaggaaactacaagtacaagaccaagtgcacctggctcatcgag
ggaacgcccgacagcatcctcagactgaggttggaccactttgctacggagtgcagctgg
gaccacctgtatgtctacgatggggactctatttacactcctctactggctgccttcagt
gggttgatagttcctgagcgctatggcaacgagacggttccggaggtggtgtcacagtcc
ggttacgccctcctccacttcttcagcgacgctgcttataacctgaccggcttcaacatc
tcatatagggtgaacacgtgtcctaacagctgttctggccgaggggagtgtcgcgttggg
aactcaacaggtgctgtgtattgtgactgtgatgccaactggaagggcgaggcctgtgat
atcccatactgcctgtcagactgtggttggcctgacaggggacactgctctcaggacaca
aagacatgtcgatgccagcctgggtggcaaggtccagactgctctgtgtccgtcccggcc
aactcttcgttctggcagcgggaagagtaccccgagccagggctggccagggcttcccac
aaggccgtagtggatcagggggtcatgtgggtcatcgggggttatgttttcaactcctca
gactaccagatggtcaaagcgtataacctcagctcccagcgctggctgtctctcaaccgc
tctgtcaactcagtcatgggacgatacggacactctctggcactacatgaggggaagatc
tacatgtacggagggaaaatagactctactggcaacgtgaccagccagctgtgggtgttc
cacatccagaaccagacctgggtgtccctctccgcccgatcccaggatcagtgggccgtg
gtgggacactctgcccacgtagtgccccccctgctggagggcggtagtccggtcatgctg
gtgctgtttggacactgccctcaatacggatacatcagccaggtgcagcagtataacttg
gctaagaacacgtggagcgccgtggttacaggtggagccctggtgcagggagggtatggc
cacagcagtgtgtttgacccctcctcccgagccatctacatccacggaggatacaaggcc
accagcgctaccaagtacggcctggccggagacctgtacaagtacgacgtggaccgcagc
cgatggacagttctaaaggacagcggcttcttccggtacctccacacggcggtcatcgtt
agtggaaccatgctggtgtttggagggaacacgcacaacgacacgtccatgagccacgga
gccaagtgcttctcctccgacttcatggcctacgacctggcatgtgatgagtggtcagtg
cttcccagaccagacctccaccatgatgtcaaccgcttcggacacacagctgtctacagt
gacagtgtaatgtacgtgttcggggggttcaacagtctcctgctgagtgacattctgatg
tacacaccagcaagctgctccagcgctcccaacgctgccgtctgtgcagcaaactggctg
ggtgttcactgcctctggaacgctaccctggggacctgcctgccctgggactccaacccc
ggacccctggatgagcagaccgccttggcttcctgtggaaccagaacatatgctgacaac
gatcgttgtgaccagtacactgactgctacagctgtacagccaatactaacggctgccag
tggtgtgctgttcagtgtgtctccgtgagctcaaactgtacggctgtcacgggggccata
gtggagtatgacgtctgtcctaaagacaacccatcatacgtctgcaacaagaagaccagc
tgtaagagctgtggtgtggaccagaactgccagtgggaacctcggaaccaggagtgcatc
tctctacctgagaatatatgtggtgagaactggcacctggttggtaactcgtgtctgaag
ttcatcacagccaaggactcgtatgataatgccaagctgacctgtcggggtcacaacgcc
gtcctggcatcactgaccaatcagaagaaggtggactttgtcctcaaggagctgcagatc
atgagcgttctgtacaaggcctcggtgacgccgtgggtggggcttaggaagatcaacgtc
tcctattggtgctgggaagacatgtcaccctttactaacacctccctccagtggttgccg
ggggaacccagcgatgccggtttctgtggttacctagcagaaccggcatccagcggcctg
aaggcccagacctgcatcaaccctgttaacggatcactgtgtgaacgagcagccaatcac
agtgccaagcagtgtcggacgccatgcgccatgcgggctacgtgcagtgactgcaccagc
agcagttctgagtgtatgtggtgcagcaacatgaagcagtgtgtggactctaatgcatac
gtcgcctccttccccttcggacagtgtatggagtggtacactatgaacagctgcccacct
gagaactgttctgggtacaggacgtgtggccagtgtctggagcagccgggctgtggttgg
tgtacagaccccagtaatactgggcgtggccagtgcatcgaggggtcctatagggggccg
ttccagactgctgtccccgccccctccaccctgcctggtccagcctctagtctcgcctct
ctgccggctctcaacatcagcatgtgtccttacgacaccaagtacaactggagcttcata
cactgtccagcgtgccagtgtaacggtcacagtcagtgtgtgaaccagactgtgtgtgag
aagtgtgaggacctgacaacaggacgtcactgtgagagctgcatctctggttactatgga
gaccccaccaacgggggcagctgccaactgtgtaagtgtaatggccatgccagtatatgt
aaccctaacaacgggaagtgtttctgcaccaccaagggcatcaaaggagaccgctgtcac
ctgtgtgaggtggaaaaccgttaccaaggcaatcctctgaaaggaacgtgttactacacc
ctgttgatagactaccagttcaccttcagtctgtcccaggaagaagaccgatactacacc
gccatcaactttgtagccacgcccgaggagcagaatcgtgatctggttgtgttcatcaac
gcctccaagaacttcaacctcaacatcacctgggccgccagcttcacagccgggacccaa
acaggtgaggagatccccattgtctcccggagcaacatcaaggagtttaaagacagtttc
tccaacgaaaactttgacttccgcaacaacccaaacatcaccttcttcgtctatgtcagc
aacttcacctggcccatcaagatacaaattgccttctctcagcacagtaacttcatggat
ctggtacagttcttcgtcacattcttcaggtaa
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