Coregonus clupeaformis (lake whitefish): 121556980
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Entry
121556980 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 16
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121556980
04121 Ubiquitin system [BR:
cclu04121
]
121556980
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121556980
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121556980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2H2
zf-C2H2_15
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
121556980
NCBI-ProteinID:
XP_041726802
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MIRVHNTQYSLFLRQADVLRRSGTLCDAVISVESQVFRAHRLVLACASKTLEHQLTLQAA
RSDQPDRLDQPHHCSLELLSPQTFQQVLDFAYTETLEVPVDDLPQLLRAAKLLEMHPLEE
QCRSQLKRNLGCLTRERREMREIREVRGTKETREITETREVQMTEERDEKESLKGSPIPE
EGDPQTIPSIDLEPQSSPFTEDPTLPDTRENSSGSSPPQRKRPKPLTPTLVTTTPPPSRD
SVIATTASTIQPPPPPPPASRVMWHQVNTLKRMAWNYNDLLAASSSSLHPSQHLVTYPFH
LSTPHMYPLLTSSIPPQIHSAVLGYPGILHPYHHHPLLSGSRELGDILKQGLLGKRDPMD
KVLIGGAPGEGQRYSQERPGRTQDCQHCSKFLLGSSWLQASTTNPPGSGETSLGCKYCDR
GFRVERSLPSHRRDQGGEKPYQCKRCSKRFSLKHQLDTHHRVHTGEKPFECRLCGQRSRD
YSAMIKHLRTHDGATPYQCTACLEFCSSLAAMQKHLKNHPLQDFPPDWTISSTYLYTCHT
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgatccgagttcacaacacccagtactccctcttcctgcgccaggcagatgtcctgcgt
cgctcagggacgctgtgtgacgctgtcatctcagtcgagagccaggtgttcagggcccat
cggctggtgctggcctgcgctagcaagaccctggagcatcagcttaccctgcaggctgca
cgctcagaccagcctgatcgcctcgaccaacctcaccactgtagtctggagctcctctcc
ccacaaaccttccagcaggttctggactttgcctacaccgagaccctggaggtccctgtt
gatgatcttccccagcttctgagggccgccaagctcctggagatgcatccactggaggag
cagtgtcgcagccagctgaagagaaatctggggtgcctgacgagagagagaagagagatg
agagaaataagagaagtgagaggaacgaaagaaactagagaaattacagaaacgagagaa
gttcagatgacagaggagagagatgagaaagaatccctgaaaggaagtcccattccagaa
gagggggatccccagacaattccctccattgatctggagccccagagcagcccattcact
gaggaccccactcttcctgacactagggagaactcctctggttcatcacccccacagaga
aaaaggccaaagccactcacacccacactagtgaccaccacaccgcctccatccagagac
agtgtcatcgccaccaccgcttccaccatccaaccccctccccctcctcccccagcatcg
agggtcatgtggcaccaagtcaacaccttgaaaaggatggcctggaactataacgacctc
ctggcagccagttcctcttcccttcacccttcacagcacctggtgacataccccttccac
ctctcaactccccacatgtaccccctgctaacgtcctccatcccgccccagatccacagc
gccgtcctgggctacccgggcatcctgcatccctaccaccaccaccccctgctctctggg
tctcgggagctgggggacatcctgaagcaaggtctgctgggaaaaagagacccaatggat
aaagtgttgataggtggagcaccaggggaagggcaaagatactcccaggaacgtccagga
agaacccaggactgtcagcactgcagcaagttcctcctgggaagctcatggctgcaggcc
tcaaccaccaacccaccaggctcaggtgagacctctctggggtgtaagtactgtgatcgt
ggcttcagggtggagcggtcactgccgtcccaccggcgagatcagggaggagagaagccc
taccagtgtaaacgctgctccaagaggttcagcctcaaacaccaattggatacacaccac
cgggtacacacaggagagaagccgtttgagtgccgtctgtgtggccagcggtcgagggac
tactcagccatgatcaagcacctgcggacccacgacggggccacaccctaccagtgtact
gcctgcctggagttctgtagcagcctggctgccatgcagaaacacctgaagaaccacccg
ctgcaggacttcccgccagactggaccatcagcagcacctacctgtacacatgccatacc
tga
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