KEGG   Coregonus clupeaformis (lake whitefish): 121558708
Entry
121558708         CDS       T08357                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121558708
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     121558708
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_RIG_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 121558708
NCBI-ProteinID: XP_045067766
LinkDB
Position
5:complement(4201913..4220582)
AA seq 2257 aa
MAKSRNISLLESELYYLISRFLTTGPCRSAAEVLASELEEYQLLPCRLDWQGNEHPRSYE
DLVAANRHIAPDHLMQICKQIGPILDKEVPSCVPGVHSLLGTGRQSLLRTSKDYGNVRRK
GSSFAALHRGRPPEMHLTCKDPPNLVEVYRGRELTGTQRFSTVNPVSNYQHMRMHRRILG
HLSAVYCIAFDRTGLRIFTGSDDCLVKIWSSFDGRLHSTLRGHSAEISDLAVSFENTLMA
AGSCDKTIRVWCLRTCAPMAVLQGHSGSITSLQFSPFAKGSKRYLVSTGTDATICFWQWD
VNNINFSDRPQKFTERPRPGVQMVCSSFSPGGMFLATGSTDDVIRIYYLGGGNPEKISEL
HEHTDKVDSIQFCHSGERFVSGSRDGTARIWRLTQRQQWRSLLLNMNATLPGSEHATNEE
SFFKPKVTMVAWDRHDNSVITAVNNHILKVWNSYTGQLLHILKGHEAEVFVLEPHPSDPR
IMLSAGHDGNVFIWDIVRGTKTQHYFNMIEGQGHGAVFDCKFTPDGQRFACTDSHGHLVI
FGFGSSKPYEKLPDQVFFHTDYRPLIRDANGFVLDEQTQQAPHLMPPPFLVDVDGNPHPP
RYQRLVPGRENIADEHLVPQLGYVATSDGEVMEQVISQLITDHEEATARRSVLDDAIRQL
QEQQDRQSRPGTLAPAEAPAQAPAFPAPSTPLRASVNERGAAEVQSSPNVGLRRSGQVEG
VRQMHQNAPRSQMATERDLQAWRRRVVVPELSSSVYSCQDDFRITKGEEEIALYNAKKRR
VTYGSCRDDSEDEVPCIKRAQSRKKQKVFQQSKDGIVEELIEFSCEEGEETATSEDHEME
GSELDSSNEEEEWKSDSSSHSSSEYSDWTADAGINLQPSTPVSSRKRVRRQLSSSEEEED
NEEEEEKQQSNEEEPPPQTSKQKSKKPKSKTPKRPKARPSINREVSNEFRPSTWITDVIP
RKSPFVPQMGDEVIYFRQGHEAYVEAVNRNNLYPINMEKQPWRKMELRDQEFVKITGIKY
EVCPPTLCRLKLTLIDHGTGKITDKSFYVKYHDMPDVIDFLVLRQSYDEARSRVWQPNDR
FRSVIDDAWWFGIIVCQEPYQPEYPDSHFQCFKVRWDNGETEKLSPWDVEAIPEDAQQPE
SVGGGVQVTAEEMREVMYKPQTGEWGERSRDDECERIIAGIDQLITVDIVAPFSGPVDIV
QYPTYCTAIAFPTDLGTIRLRLINRFYRRLSALVWDARYIVHNARTFNEPRSKIAHSAKL
ITDVLQKFINRPSCTDIMEIYNAIEDMDYTDDEDLEEAPGPSSGHRLRQRSVETVPDRDS
WKGQCKRLMNYVFECEDSEPFRKPVDPTSYPDYLSIIDTPMDFGMVKGTLEEDRYENPME
LCKDTRLIFANAKAFTPNKRSKIYSMTLRLSAFFEERIRTIISQYKTAVKSSEMLRRSQR
FRKKLQHHESAAPSITTTNQKRAALKTQEKVEVASTTKSTSAKVSAPERTRRRSHNSDSS
GHSSSEASSGSDSEIESELSMSDSEEEKRPGSSRHHHSRETRGTRRVTRNNGAKTTKIAE
SEEESSNEESEDGGKSSNSLSRRFPSRSSSRSTRLTRNNAAAHRKHTKRPERGAQMNGHS
RKCVRERQLDSDSERSPYQGTDTYREENVGRRTMKRKTARAAVNKMKLLEASEEDYGSEE
EDKHRRKSSRHATRVSKRTAMIQSSSESEDQSSAQSSKKGKDTLGDWENNEDSIESEASS
SRCHQNGESKNSSSRMTTRQAAGTGGKDDLSHVNGHSTKHDSNSEEEESSDGEEEEEEEK
EDKAVVSQKSSRSMATAAVSKSRTCITSYVAEEKSGSRKRQHKPLASSDEEYRDHNAQKH
PHQNGRKVEKEHPKGSEKNSKLPSKSQEQTSASTHKQDGPESEELSDTPKRSSSRKKRVK
SEEEEEDGEEEDEEDRNHSDDESKGESNKKRQLRNNNNNKPKRQSHTDSVSESEEEEVVP
NRRARRKLHASSEEESDRKEKHSPSRRPCLRAQPKKKYINEDSEEDLNSEMQGSCKNGKS
NAVSDKGHQRNRRKASPAATKQQSSSKRKRIYTSDSSDNPDEKKRCMPKAKSYCEDQDER
ETKRSNSKHPKKESRSKSEPEHCNSQEDASSHPGSEDEKEVECPREKRHLERQKRKQKES
CSSSAHSSASESEEEEESSASEKSAASSGSQSSPKRKSHKRSRVSDKGAARHSRQRRRDP
SEADSDQPYAEFQRGACGTRIKTRNRGKRTVTYHDSE
NT seq 6774 nt   +upstreamnt  +downstreamnt
atggccaaaagtcggaatatttcgctccttgaatcggagctatattacctaatttcacgt
tttctgacaacgggtccatgtcggagtgcggctgaggttctagcgagcgaactagaagag
tatcagcttttaccctgcagattagactggcaaggaaatgaacatccaagatcttacgaa
gatttggttgcagccaacagacacattgcacctgaccatttgatgcagatctgtaaacag
attgggccgattctggacaaagaggtgccatcatgtgttccaggcgtacattccctactg
ggaaccgggaggcagtccttactcagaacttcaaaagattacggcaatgttcggaggaaa
ggctcgtcatttgctgccctgcacagagggagaccaccagagatgcatttgacctgcaag
gatcctccaaatctagtggaggtttacagaggaagggagctgacaggtactcaacggttc
agcactgtgaaccctgtgagcaactatcagcacatgcggatgcacaggaggattctgggt
catctgtctgcagtttactgcatcgcttttgatcgaaccggtctcaggattttcactggc
tcggacgactgcttggtgaaaatatggtcttcgtttgacgggaggcttcactccacactg
agaggacattctgctgagatctcagacctggctgtcagctttgagaataccttgatggcg
gctggcagttgtgacaaaaccatccgagtgtggtgccttcgtacctgtgcccctatggct
gtcctacaggggcacagtggctctattacctccctacagttctcaccgtttgccaagggc
tcaaagagatacctggtgtccactggaactgatgcaacaatctgcttttggcagtgggat
gtcaataacataaatttcagtgatcgcccgcagaagtttacagagcgacccaggccggga
gttcagatggtgtgctcatcattcagtccaggtggcatgttcttagcgacgggaagtact
gacgatgtcatcagaatttattacctgggaggtgggaaccctgaaaaaatatcagagctt
catgaacacacggacaaggttgacagcatccaattttgccactcaggagaaaggtttgtg
agtggcagtcgagatggcacagcacgcatctggaggctgactcagcgtcagcagtggagg
agccttcttctcaacatgaacgccactctaccaggctcggaacacgcaaccaatgaggaa
agctttttcaagcccaaggtcaccatggtagcgtgggatcgccatgacaactcagtaatc
acagcggtcaacaaccatatcctcaaagtgtggaactcctacacgggccagctgctacat
atccttaaaggccacgaggctgaagtgtttgtcctggagccccacccctcagaccccagg
atcatgctgtctgctggccatgacggaaacgtcttcatctgggacatcgtccggggcaca
aagacacagcactacttcaacatgattgagggccagggtcatggtgctgtctttgactgc
aagttcactcccgacggccagcgctttgcctgcacagactcccacggccatctggtcata
ttcggctttgggagctctaagccatacgagaagcttccagatcaggtgtttttccacact
gactatcggccactgatccgggacgccaatggctttgtgctggacgagcagacccagcag
gcaccccacctcatgccccctcccttcctggtggatgtggatgggaacccccaccccccc
agataccagcggctggtccccgggagggagaacattgctgacgaacacctggtgcctcag
ctgggatatgtcgccacaagtgatggcgaggtgatggagcaggtgatcagtcagctgatc
acggaccacgaggaggccacggccagacgcagtgttctggatgacgccatcaggcagctg
caggagcagcaggacaggcagagcagaccagggacattggccccagcagaggctccagca
caggccccagcattcccagcccccagcaccccactcagagcgtcagtgaatgagcgaggt
gcagctgaggtgcagtcgtcccctaacgtgggtctgcggcgcagtgggcaggtggagggg
gtgagacagatgcaccagaacgcccctcgcagccagatggccacggagcgggacctgcag
gcctggagacgcagggtggtggtacctgagctctcatccagcgtctacagttgccaggat
gacttccgaattacaaaaggagaggaggaaattgccttatacaatgcaaagaaacgacgt
gtgacatacggaagttgtagagatgattctgaagatgaggtgccttgcatcaaacgtgca
cagtcccgcaaaaagcaaaaagtcttccagcagagcaaagatgggattgtggaggaatta
atcgagttctcctgtgaggagggagaggagaccgcaacatcagaggaccatgagatggag
ggcagtgaactggattcatccaatgaggaagaggaatggaaaagtgacagttcaagccac
tcgtccagtgagtactctgactggacagcggacgctgggattaacctgcagccctccact
cccgtgtcatcacggaaacgagttcgccgccagcttagcagctcggaggaagaggaagat
aatgaggaggaagaggagaagcagcaaagtaacgaggaagaaccacctcctcagactagc
aagcagaaatccaagaagcccaaaagcaagacgcccaagcggcctaaagccaggccatcg
atcaatagagaagtgtccaacgagttcagaccctcaacgtggatcactgatgtcattccc
aggaagtctcccttcgttccccagatgggtgatgaggtaatctatttccgccagggtcac
gaggcgtatgtggaggcggtgaacaggaacaacctgtaccccattaacatggagaaacag
ccctggaggaagatggagctgagggaccaagagtttgttaaaataactgggatcaagtat
gaagtgtgccctccgacactgtgccgcctgaaactgacgctcattgaccacggcacgggc
aaaatcacagacaaatcattttatgtcaagtaccatgacatgccggatgtgattgacttc
ctcgtgcttcggcagagttatgacgaagcacgcagtagagtctggcagccaaatgaccga
ttccggtcagtaatagatgatgcctggtggtttgggatcattgtttgtcaggagccatat
cagcctgaatatccggacagtcatttccagtgcttcaaagtcagatgggacaatggcgaa
acggagaagctaagtccttgggatgtggaagctattccagaggatgcccagcaacccgag
tctgtaggtggaggggttcaagtgacagcagaggagatgagagaggtcatgtataaaccg
cagacaggagagtggggtgagaggagcagagacgacgagtgtgaacgcatcatagcaggc
attgaccaactcatcaccgtcgatattgtagccccattctctggcccagtggacatagtt
cagtatccaacctactgcactgcgatagccttcccgacagacttgggcaccatcagactg
agactgataaataggttctacaggcgactgtccgctttagtttgggatgccagatacatt
gtgcacaatgcccggaccttcaatgagccaaggagcaagatagcccattcagcaaaactt
atcacagatgtcctgcaaaaatttatcaatcgacctagctgtacagatatcatggagatc
tacaatgctattgaagacatggactatacggatgatgaggacctggaagaggcaccaggc
ccctcttctggacacagactgcgtcagcgctctgtggagacggtacctgaccgggactcc
tggaaggggcagtgcaagcgtctgatgaactatgtatttgagtgtgaggactcagagccc
ttccgaaagcctgtggatcctacctcctacccagactaccttagcatcattgacactccc
atggactttgggatggtgaaggggacccttgaggaggaccgctatgaaaaccccatggag
ctctgcaaagacacacgtctgatatttgccaacgctaaagccttcacaccaaacaaacgc
tcaaagatctacagtatgactttgcggctctctgcattcttcgaagagcgaatcagaaca
atcatatcgcaatacaaaactgccgtcaagagcagcgagatgctccgccgcagccagagg
ttccggaagaagcttcagcaccacgagtctgctgcacccagcattaccaccacaaatcaa
aagagggctgctctaaaaactcaggaaaaagtggaagtggcgtcgacgaccaaatctacc
tcagccaaagtgtctgctcctgagagaaccaggaggaggagccacaacagtgacagctca
ggccacagctcttctgaagcctcctcagggtcagactctgagattgagagtgagttatct
atgagtgactctgaagaggagaaacgcccagggtcctcacggcaccatcacagcagagag
accaggggaaccagaagagtcaccaggaacaatggggcaaagactacaaaaattgctgag
agtgaggaggagtcctccaatgaggagagtgaggacggtgggaagtcgtccaactctttg
tctcgccgattcccaagcaggtccagcagcaggagcaccaggctgaccagaaacaatgct
gctgcccataggaaacacaccaaacggccagagagaggtgcccagatgaacggtcacagc
aggaaatgtgtgcgagagaggcagctagacagcgactctgagagatccccataccagggt
acagacacctacagggaggagaatgtgggccgcaggacaatgaaaaggaagactgccagg
gcggccgtcaacaagatgaagcttctggaagcctctgaggaagactatggttctgaggaa
gaggacaaacataggaggaaaagcagccgccatgcgacccgagtcagcaaacgcactgcc
atgatccagagcagctctgaatcagaggatcagtcatcagcacagagttctaaaaaaggc
aaggatacattgggtgattgggagaacaatgaggacagtattgagagtgaagcttcatcc
tctcgttgccatcagaatggagagagtaagaactccagcagccgcatgacgaccagacaa
gctgcagggacagggggtaaagatgatttgtctcatgtaaatgggcacagcacaaaacat
gacagtaactcggaggaggaggagagttctgatggtgaagaagaggaggaggaagaaaaa
gaggataaagctgttgtgtctcaaaagtcctccagaagcatggcaaccgctgcagtgagc
aaaagtagaacttgcattaccagttatgtggcagaggagaagtctggctccagaaagaga
caacacaaacctctggcaagctctgacgaggaataccgagaccacaatgctcaaaagcac
cctcaccaaaacgggagaaaggtggagaaagaacatcctaaaggctctgagaaaaatagt
aaattaccatcaaaaagccaagaacaaacatctgcctcaacccacaaacaggatggccct
gaatcagaggaactcagtgacaccccaaagagatcaagctctcgcaagaaaagagtgaag
tcagaagaggaggaggaagatggggaggaagaagacgaagaagaccgcaaccactcagat
gatgaatctaagggagaatccaataaaaaacgtcagttgcgaaacaacaacaacaacaaa
cccaaaagacagagtcacactgactctgtttcagagagcgaggaggaggaagttgtaccc
aacaggagagcaaggaggaaactgcatgcttcctcagaggaagaatctgatcggaaggag
aagcatagccctagcaggcggccttgccttcgagcccaaccaaaaaagaaatacatcaat
gaagactctgaggaggacttgaactctgagatgcaaggcagttgtaagaatgggaagagc
aatgctgtttcagataaaggacatcaacgcaaccgacgaaaagcctccccagctgctaca
aaacaacagtcctcttccaagagaaaacgcatttacacctcagactcctcagacaaccct
gatgaaaagaaacggtgcatgcccaaggctaagagctactgtgaagatcaggacgagagg
gagacaaaaagatccaactccaagcatcccaagaaggaatctcgatccaagtctgaaccc
gaacactgtaatagtcaggaagatgcctcttcccacccagggtcagaggatgagaaggag
gttgagtgtccgagggagaagagacatttggagcgacagaaacgcaagcaaaaggaaagc
tgcagcagcagtgcccacagttctgcctctgaaagcgaggaggaggaagagtcctctgcc
tctgagaagtccgctgccagctcagggtcccagagcagtccaaagagaaaaagccacaag
aggtcaagggtcagcgacaagggtgccgcgcgccactctcgacaacggcggagggacccc
tctgaggcagacagtgaccagccgtacgcggaattccagagaggagcgtgtggaacgcgt
atcaagacccgaaaccgcggcaaacgaacggtgacatatcacgacagcgaatga

DBGET integrated database retrieval system