Coregonus clupeaformis (lake whitefish): 121565383 Help Entry 121565383         CDS       T08357                                  Name (RefSeq) calpain-1 catalytic subunit-like   KO K01367   calpain-1 [EC:3.4.22.52] Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04141   Protein processing in endoplasmic reticulum cclu04210   Apoptosis cclu04217   Necroptosis cclu04218   Cellular senescence cclu04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     121565383  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     121565383    04217 Necroptosis     121565383    04218 Cellular senescence     121565383  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     121565383  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:cclu01002]     121565383 Enzymes [BR:cclu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      121565383 Peptidases and inhibitors [BR:cclu01002]  Cysteine peptidases   Family C2: calpain family    121565383 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III CAPN13-like_C_EFh EF-hand_1 EF-hand_7 EF-hand_6 EF-hand_8 EF-hand_5 Motif Other DBs NCBI-GeneID:  121565383 NCBI-ProteinID:  XP_045064928 LinkDB All DBs Position 29:complement(1390533..1423290) Genome browser AA seq 708 aa AA seqDB search MPPPGVCVSIMQERHKKEGVGSLANPEKHSNQDFQRLKQYCLVRGVRYIDEMFPPDHNSI GDGLLSPDDMGRVVWLRPAKIVRNPDFIVDGISRFDFGQGIVGDCWFLASIGALTFQKHI LEQVVPLNQSFKDDYCGIFHFRFWRFGRWVDVVIDDKLPTVDGRLIFVHSKTPNEFWPAL LEKAYAKVCGSFADMNLGTTSEAMMDFTGGVHITFKLTDAPPNLWDLLFRAAKSKSLIGC GTPQGETSANTVAPNGLVRGHAYTVTGVSQIMSQGMPVNLIRLFNPWGQGEWIGDWSDNS SLWQTVSPDDQKMFLSVEENGEFWMTMKHFCENFAEVDICSLCPDFLDGNPTCHWTPSFH VGRWVAGTTAGGCMNFPNSFWTNPQYRVKIGGLGGDCSETQGDNNMLVSLMQKPDKRNRR LVKSLHIGFSIFEVPAKFKSQKGKFPAFFFNNNVPVAQSKNYLNAREVMEFFRLKPGEYL IVPSTFKPNETASFILSIVSKVKPQIHENSNDQDMEEILFSPKTPTLTPTVDLEHKGGDV DSKKTLFQKYSDEFEEVDAEQLQRTLNENLIQGNVKKTQGFSLESCQSMVALMDTSITGK LNVAEFLRLWRKVAKYKDIFFRTDVDRSGMLSLSELRNAIMASGIRVGDDMLNLMALRYG GCSGNISLESFISLVLRMDCMTKIFRQLNNGGAISLQENEWMYISMYT NT seq 2127 nt NT seq  +upstreamnt  +downstreamnt atgcctcctcccggtgtgtgcgtgagtataatgcaggagcgccacaagaaagagggtgtt gggagccttgccaacccagagaaacacagcaaccaagacttccagcggctgaagcaatac tgtttggtcaggggggtaaggtatatcgatgagatgttccccccagaccacaactccatt ggtgatgggctactttcccctgatgacatgggcagggtggtgtggttgagaccagcgaaa attgtacggaatccagattttattgttgatggaatttcaaggtttgactttgggcaagga atagttggagattgctggtttcttgcttccattggggctttgacgttccagaagcacatc ctggagcaagtagtgcccctaaaccaaagctttaaagatgactactgcggaatattccac ttccggttctggaggtttgggaggtgggtggatgttgtgatcgatgacaagctaccaaca gttgacggcaggctcattttcgttcattcaaaaactcccaatgagttttggcccgccttg ctggagaaagcctacgccaaggtgtgtggctccttcgcagacatgaatttagggaccact tcagaggctatgatggacttcactggaggggttcacatcacgttcaagctcactgacgct ccaccaaatctgtgggacctcctgttcagagctgccaagtcaaaatctctgattggatgt ggcacacctcaaggggaaacatcagcgaacacggtggcacccaacggattagtgagggga catgcctacaccgtcacaggagttagccagatcatgagccaaggcatgccagtgaatctg atccgcctcttcaacccctggggccagggagagtggattggagactggagcgataattcc tccctgtggcaaacagtgagtcctgacgatcagaagatgtttctgtcagtggaagagaat ggggaattctggatgacaatgaaacatttctgtgagaatttcgcagaagtggatatctgc agtctgtgccctgattttctcgatggcaaccccacttgtcattggaccccctcattccac gttggcagatgggttgcaggaaccactgctggtggttgcatgaatttcccaaacagtttc tggaccaatccccagtatcgggtgaagattgggggattgggcggggactgctctgagaca cagggggacaacaacatgttggtgtctctgatgcagaagcctgataaaagaaacagacgc ctggtcaaaagtctccacattggcttctccatctttgaggtgcctgccaaattcaaaagc cagaaggggaagtttcctgccttcttcttcaacaacaatgtgcctgtcgcccaatccaag aactacctgaacgctcgggaagtgatggagttcttcaggttgaaacctggtgaatacctg atcgtgccatcaaccttcaaaccaaatgaaaccgcctccttcatcctgtccatcgtctcc aaggtgaagccccaaatccatgaaaattccaatgaccaagatatggaggaaatcctgttt tccccaaaaaccccaacgctcacacctacagtcgatctagaacacaagggaggagatgtg gacagcaaaaaaactctgtttcagaagtattctgatgagtttgaggaggtggatgctgaa cagcttcagaggactctgaatgaaaatctgatccaaggaaatgtaaagaaaacacaaggc ttcagcttggagtcctgtcaaagcatggtggccttgatggatacatcaatcactggaaaa ctgaacgttgctgaatttctacgtctatggagaaaagttgccaagtacaaggacatcttc ttccgcacagatgtggaccgttctggaatgttgtcattgagtgaactgaggaacgcaatc atggcttcagggatcagggtgggtgatgacatgctaaacctgatggctctgcgctacggt ggatgttctggaaacatcagcctggagagtttcatcagcctagtcctacgcatggactgc atgaccaaaatattcagacaactcaataatggaggggccatatctcttcaagagaatgag tggatgtacatctccatgtatacataa

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