Coregonus clupeaformis (lake whitefish): 121566230
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Entry
121566230 CDS
T08357
Name
(RefSeq) septin-5 isoform X1
KO
K16943
septin 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121566230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121566230
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121566230
04812 Cytoskeleton proteins [BR:
cclu04812
]
121566230
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
121566230
Cilium and associated proteins [BR:
cclu03037
]
Motile cilia and associated proteins
Sperm associated proteins
121566230
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
121566230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
GTP_EFTU
AIG1
VapE-like_dom
Ras
Dynamin_N
ABC_tran
Roc
AAA_16
nSTAND1
AAA_29
AAA_22
Motif
Other DBs
NCBI-GeneID:
121566230
NCBI-ProteinID:
XP_041732314
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAECTVAPVAMEDSDHEAHSSSDDQDSAPPSPDHTRDHHHEAEQHSSHSKDDSEDSELEN
IMQQDPHHNGGHPQPHPPPPGYEHSFDHEHPHPVDREAEGGDSPPNTPGTPTPGTPPFLR
PPTAGGRAQSDNQGVGRLQLGGGGMVDHYDMQSPLSPTRPKSPWGRFDPYDFPEDQDKEY
VGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDLYKDRKLLNAEERITQ
TVEITKHTVDIEEKGVKLKLTIVDTPGFGDAVNNTECWKSVADYIDQQFEQYFRDESGLN
RKNIQDNRVHCCLYFISPFGHGLRPLDVEFMKALHEKVNIVPILAKADTLTPTEVKKKKF
KIREEIQQYGIKIYQFPDCDSDEDEDFKQQDQELKDSIPFAVIGSNTVVEAKGKRVRGRL
YPWGIVEVENSAHCDFVKLRNMLVRTHMQDLKDVTRETHYENYRAHCIQSMTRMVVKERN
RNKLTRESGTDFPIPVIPSTTDTETLIREKDEEVQRRHSEHEPEHGHGHNEHSDPPLERH
SDPGLDPGPEPEAS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtgcactgtagccccagtagcaatggaggacagtgaccatgaggctcactca
tcatcagatgaccaggactccgccccgccatcccctgaccacaccagggaccaccaccat
gaggccgaacagcactcaagccattccaaggatgactctgaagactctgagttggagaac
atcatgcaacaagacccccaccacaatgggggccatccacagccccacccacctccaccc
ggctatgagcacagctttgaccatgagcacccccacccggtggacagggaggcggagggt
ggcgacagcccccccaacacccccggaacgcccacccctgggaccccaccctttttgcgc
ccccccacggcgggtggcagggcccagtcagacaaccagggtgtagggaggctgcagctg
ggtggaggtgggatggtggatcactatgacatgcagtctcccctcagtcccaccagaccc
aagagcccctggggccgatttgacccctacgactttccagaggaccaagacaaggaatac
gtgggctttgccacactgccaaaccaggtgcaccgtaagtctgtcaagaagggctttgac
ttcaccctgatggtagcaggggagtctggtctgggcaagtccaccctggtcaatagcctc
ttcctcacagacctctacaaggacaggaagctacttaacgctgaggagcggatcactcag
acagtggagatcacaaaacacacagtggacattgaggagaagggtgtcaagctgaagctc
accatcgtagacacccctggctttggagacgctgtcaataacactgaatgctggaagtca
gtggcggactacatcgaccagcagtttgagcagtacttcagggacgagagtggactgaac
aggaagaacatccaggataacagagtccactgctgcctctacttcatctctccctttgga
cacggtctgaggcctctggatgtggagtttatgaaggcccttcatgagaaggtcaacatt
gtgccaatcctggccaaggcagacacactcacacccaccgaggtcaagaaaaagaaattc
aagatccgagaggagatccagcaatatgggattaagatctaccagtttccagactgtgac
tctgatgaggatgaggacttcaaacagcaggatcaggagctcaaggacagtataccgttt
gcagtgatcggcagcaacacggtggtggaggccaaagggaagagggtccggggtcgtctc
tacccttggggcatcgtggaagtggagaactcagcgcactgtgactttgtgaagctgagg
aacatgttagtgaggacacacatgcaggatctgaaggatgtgacacgggagacccactat
gagaactacagggctcactgcatccagagcatgacccgcatggtggtgaaggaacgcaac
cgcaataaactgaccagggagagcggcacagacttccccatccctgtaataccaagtacc
acagacacagagacgctgatccgagagaaagacgaagaggtacaacgacgacactcagag
cacgaaccagagcacggccacggtcacaatgagcactcagacccacccctagaacgccac
tctgacccgggcctagacccaggacctgaacctgaggcctcttga
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