Coregonus clupeaformis (lake whitefish): 121567881
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Entry
121567881 CDS
T08357
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121567881 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121567881 (raraa)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121567881 (raraa)
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
121567881 (raraa)
BRITE hierarchy
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121567881
NCBI-ProteinID:
XP_041734169
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All DBs
Position
1:36673699..36892922
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AA seq
496 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGVPHPYSSSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESPRSSSKGGMALGPQPPPPPLETG
RGQTGAPGADRAAPPAVRNDRNKKKKDEKKPECTESYVLSTETEQMINRVSKAHKETFPS
LCQLGKYTTSNSSERRVALDVNLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLL
KAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEM
DDAETGLLSAICLLCGDRQDLEQADKVDVLQEPLLEALKIYVRKRRPHKPHMFPKMLMKI
TDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLESGATGSRTSGAPPGSCSPSL
SPSSAQSSPSPTTQSP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagtgtggacgtcgtgggactgaatcccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgtttgatcccggagaaaggacttgtgcctgga
gtgccccatccctacagctcgtccatcagaaaccaacactggaacggctcaaatcactct
atagagacgcagagtaccagctcagaggagatagtgccaagcccgccgtcgccccctcct
cccccgcgggtctacaagccctgcttcgtgtgccaggacaagtcctcaggataccactat
ggagtcagcgcctgcgaaggctgcaagggcttctttcggaggagcattcagaagaacatg
gtgtatacgtgtcaccgggagaagaactgcatcatcaacaaggtcaccaggaaccgctgc
cagtactgccggctgcagaaatgcctggaagtgggcatgtccaaggagtctcctcggtcc
agctccaaaggcgggatggcgttgggcccccagccgccgcccccacccttggagaccggg
aggggacagactggggcgccaggggcagacagggcagctcccccggcggtgaggaacgac
cggaacaagaagaagaaggatgaaaagaagccagagtgtactgagagctacgtgctgagc
actgagacggagcagatgatcaacagggtcagcaaggcgcataaggagaccttcccttcg
ctctgccagctgggcaaatacactacgagtaacagctcggagcggcgtgtggctttggac
gtgaacctgtgggacaaattcagtgagctgtccaccaagtgtatcatcaagacggtggag
tttgccaagcagctgcccggcttcaccacgctcaccatcgctgaccagatcaccctgctc
aaggccgcctgtctggacatactgattctgcggatctgcacgcgctacacgccggagcag
gacaccatgacgttctcggacggcctgacgctaaaccggacccagatgcacaatgccggc
ttcggaccactcaccgacctggtgttcgccttcgccaaccagctcctccccctggagatg
gacgacgctgaaacggggctgctcagcgccatctgtctgctgtgtggagatcggcaggac
ctggagcaggcagacaaggtggacgtactacaggagcccctactggaggctctgaagatc
tacgtgaggaagaggaggcctcacaaaccacacatgtttcccaagatgctgatgaagatc
accgacctgaggagcatcagcgccaaaggagccgagcgtgtcatcaccctgaagatggag
atcccgggctccatgccccctctcatccaggagatgctggagaactctgagggtctggag
agcggggccacaggctcccggaccagtggggcccccccaggcagctgcagccccagcctg
tccccaagttccgcccaaagcagccccagccccaccacgcagtcaccgtag
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