Coregonus clupeaformis (lake whitefish): 121567913
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Entry
121567913 CDS
T08357
Name
(RefSeq) septin-5-like isoform X1
KO
K16943
septin 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121567913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121567913
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121567913
04812 Cytoskeleton proteins [BR:
cclu04812
]
121567913
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
121567913
Cilium and associated proteins [BR:
cclu03037
]
Motile cilia and associated proteins
Sperm associated proteins
121567913
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
121567913
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
GTP_EFTU
AIG1
VapE-like_dom
Ras
Dynamin_N
ABC_tran
Roc
AAA_16
nSTAND1
AAA_29
AAA_22
Motif
Other DBs
NCBI-GeneID:
121567913
NCBI-ProteinID:
XP_045076467
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All DBs
Position
6:complement(39218380..39321184)
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AA seq
555 aa
AA seq
DB search
MKSWLRGGKRARLLHLIQGTECTVAPVAMEDSDHEAHSSSDDLDSPPPSPGHTRDHHHEA
EQHSSHSKDDSEDSELENIMQQDPHHNGGHPHPHQPPPGYEHSPDPVDREAEGGDSPPNT
PGMPTSGTPTFLRPPTAGGRAQSDNQGIGRLQLGGGGMVDHYDMQSPLSPTRPKSPWGRF
DPYDFPQDQDKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDLYK
DRKLLNAEERITQTVEITKHTVDIEEKGVKLKLTIVDTPGFGDAVNNTECWKSVADYIDQ
QFEQYFRDESGLNRKNIQDNRVHCCLYFISPFGHGLRPLDVEFMKALHEKVNIVPILAKA
DTLTPTEVKKKKFKIREEIQQFGIKIYQFPDCDSDEDEDFKQQDQELKDSIPFAVIGSNT
VVEAKGKRVRGRLYPWGIVEVENSAHCDFVKLRNMLVRTHMQDLKDVTRETHYENYRAHC
IQSMTRMVVKERNRNKLTRESGTDFPIPVIPSTTDTETEKLIREKDEEVPRRHSDPTLEP
HSDPGLDPGTEPEAS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaagagctggttgagaggaggcaagagagccaggctgttacatctcatacagggtact
gagtgcactgtagccccagtagcaatggaggacagtgaccatgaggctcactcatcatca
gatgacctggactccccaccgccatcccctggccacaccagggaccaccaccatgaggcc
gaacagcactcaagccattccaaggatgactctgaagactctgagttggagaacatcatg
caacaagacccccaccacaacgggggccacccacacccccaccagcctccgcccggctat
gagcacagccccgacccggtggacagggaggcggaggggggcgacagcccccccaacacc
cccgggatgcccacctctggaacccccacctttttgcgcccccccacggcgggtggcagg
gcccagtcagacaaccagggcatagggaggctgcagctgggtggaggtgggatggtggat
cactatgacatgcagtctcccctcagtcccaccaggcccaagagcccctggggccgcttt
gacccctatgactttccacaggaccaagacaaggaatacgtgggctttgccacactgcca
aaccaggtgcaccgtaagtctgtcaagaagggctttgacttcaccctgatggtagcaggg
gagtctggtctggggaagtccaccctggtcaacagcctcttcctcacagacctctacaag
gacaggaagctactcaatgctgaggagcggataactcagacagtggagataactaaacac
acagtggacattgaggagaagggcgtcaagctgaagctcaccatcgtagacacccctggc
tttggagacgctgtcaataacactgaatgctggaagtcagtggcggactacatcgaccag
cagtttgagcagtacttcagggacgagagtggactgaacaggaagaacatccaggataac
agagtccactgctgcctctacttcatctctcccttcggacacggtctgaggcctctggat
gtggagtttatgaaggcccttcatgagaaggtcaacattgtgccaatcctggcaaaggca
gatacactcacacccaccgaggtcaagaaaaagaaattcaagatccgagaggagatccag
cagtttgggattaagatctaccagttcccagactgtgactctgatgaggatgaggacttc
aaacagcaggatcaggagctcaaggacagtataccgtttgcagtgatcggcagcaacaca
gtcgtggaggccaaagggaagagggtccggggtcgtctctacccctggggcatcgtggaa
gtggagaactctgcgcactgtgactttgtgaagctaaggaacatgttggtgaggacacac
atgcaggacctgaaggatgtgacacgggagacccactatgagaactacagggctcactgc
atccagagcatgacccgcatggtggtgaaggaacgcaaccgcaataaactgaccagggag
agtggcacagacttccccatccctgtgataccaagtaccacagacacagagacggagaag
ctgatccgagagaaagatgaagaggtaccacgacgacactcagacccaaccctagaaccc
cactctgacccgggcctagacccagggactgaacctgaggcctcctga
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