Coregonus clupeaformis (lake whitefish): 121569930
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Entry
121569930 CDS
T08357
Name
(RefSeq) cadherin-7-like
KO
K06799
cadherin 7, type 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121569930
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121569930
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
121569930
NCBI-ProteinID:
XP_041737209
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Position
7:14426201..14569539
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AA seq
803 aa
AA seq
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MRWCGSGSVWRAGAVLALLLPLWELGCCGLISASGASGTQNQAQHTAGGPWELLHRHKRS
WVWNQFFVLEEYTGEEPLYVGKLHSDVDKGDGKVKYVLSGEGSTSIFTIDENTGDIHATK
RLDREEQAYYTLQAQAVDRLTNVPVEPRSEFVVKVQDINDNEPKFLDGPYMAGVPEMSAL
GTTVVQVAATDADDPTYGNSARVVYSIISGQPYFSVDPKTGVIRTALPNMDREVKDQYVL
VIQAKDMVGQMGGLSGTTSVTVTLTDVNDNPPHFSRKNYQYMVLESLPVASVVARVKALD
NDIGPNAEMEYRIMEDGPGVFNITTDEDTQEGVIILQKPLDFETRNSFNLRIEATNRNID
PAFVHLGSFSDTTSVKVTVEDVNEPPVFSTQLSKMVVSEDARVGTSIGRVSAHDPDSSNS
AIRYSIDRNTDLERFFNVDALSGVISTAKPLDREVNSVHNLTILAMESHDPTQIGKGFAV
ITVLDINDNSPVFAIEYETLLCENAAPGQVIQTISAVDKDEPPSGHRFYFALAASVAGNS
NFTLRDNKDNTASIVTKRGGFRRREQVLYQLPVLIVDSGSPALSSTNTLSVSVCDCDSDG
VAQSCGVVAYTLPAGLSTGALVAILGCIITLLVMVLLIVSMRRRKKEPLILEEERDVREN
IVRYDDEGGGEEDTEAFDMVALRNLNVIRDPKVRRDVTPDTPNFFPYPTSSSSLPVYKTL
PDNVVFREFIWDRLKDADVDPSAPPYDSLQTYAFEGNGSVAESLSSLESLSTDSEQNYDY
LSNWGPRFKKLADLYGDGNNVFS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggtgtggctcaggaagtgtgtggagagcaggggctgtcctggctctgctgctt
cccctctgggagctgggctgctgtgggttgatatccgcctctggggcctctgggacacag
aaccaggcccagcacactgctggaggcccatgggagctgcttcacaggcacaaacgcagc
tgggtatggaaccaattctttgtcctggaggagtacacaggcgaagaaccgctgtatgtt
ggcaagctccactcggacgttgacaaaggggacggcaaagtgaagtacgtgctctccggg
gagggctccacctccatcttcaccatcgacgagaacacgggggacatccacgccactaag
cgtctggaccgggaggagcaggcctattacaccctgcaggcacaggccgtggaccggctc
accaacgtccctgtggagcccaggtcagagtttgttgtcaaggtccaggacatcaacgac
aacgagcccaagttcctggacggaccctacatggccggggtaccagagatgtcagcactg
ggaacaacggtggtccaagtggcggccacagatgcagatgaccccacatacgggaacagt
gccagggtggtctacagcatcatcagcggacagccttacttctcagtcgacccgaaaaca
ggcgtcatccggacggcactgcccaacatggaccgggaggtgaaggaccagtacgtgttg
gtcatccaggccaaagacatggtgggccagatgggcggcctctccggcaccacctctgtc
acggtcactctcactgacgtcaacgacaacccgccacacttctctcgtaagaactatcag
tacatggtgctggagtccttgcccgtggcgtccgtggtggccagggtcaaggctctggac
aatgacataggccccaatgcagagatggagtataggatcatggaggacggacctggggtg
ttcaacatcactacagacgaggacacgcaagagggcgtcatcatccttcaaaagccatta
gactttgagaccaggaacagctttaacctgcgaatcgaagccaccaatcggaatatcgac
ccagcgttcgtgcacctgggttcattcagcgacacgacgtcggtcaaggttacggtggag
gacgtgaacgagccgcccgtattctccacacaacttagcaagatggtggtctccgaggat
gccagagtgggcacctccatcgggagggtctccgctcacgaccctgactcctctaacagt
gccatcaggtactccatagacagaaacacagacctggagcgtttcttcaacgtggatgct
ctgagtggtgtcataagcacagccaaacccctggatcgagaggtcaactctgtccacaac
ctcaccatccttgccatggaaagccatgatccaacccagattggaaaaggttttgcagtc
attacagtgctggacatcaatgacaactctccagtatttgccattgagtatgagaccctc
ctgtgtgagaatgcagctcctggacaggtcatccagaccatcagtgctgtggacaaggac
gagcctcccagtggtcatcgcttttactttgccttggctgcatctgtggctggcaactcc
aacttcacactcagagacaacaaagacaacacagcgtccatcgtaacgaaacgtggaggg
ttccggagacgggagcaggtgctgtaccaactgcctgtgttgatcgtagacagtggaagc
cccgcactcagtagcaccaacaccctatcagtgagcgtgtgtgactgtgactcggacggc
gtagcccaatcgtgtggggtcgtggcgtacacacttcctgccggcctcagtacaggggcc
cttgtcgccattctgggctgcatcattacactcctggtgatggtgctgctgattgtgtcg
atgcgtcggaggaaaaaggagcccttgatcctggaggaggagagggacgtgagggagaac
atcgtccgctacgacgacgaaggtggaggagaggaggacacggaggccttcgacatggtg
gccctccgcaacctcaacgtcatcagagaccccaaggtccggcgagacgtcacccctgac
acccccaacttcttcccctacccgacatcctcctcctcgcttcccgtctacaagaccctg
ccggacaacgtggtgttccgagagttcatttgggaccggctaaaggacgcagatgttgat
ccgtcagctccgccatatgactctttgcagacatatgccttcgaggggaatggttcggta
gctgagtcgttaagctccctggagtcactaagtacagactcagagcagaactacgactat
ctcagcaactgggggccgcgtttcaaaaagctagccgacctgtacggcgacggcaacaac
gtgttctcatag
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